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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_07470 and CSW01_07475 overlap by 23 nucleotides
CSW01_07475 and CSW01_07480 are separated by 8 nucleotides
CSW01_07480 and CSW01_07485 are separated by 459 nucleotides
CSW01_07485 and CSW01_07490 are separated by 154 nucleotides
CSW01_07470: CSW01_07470 - ABC transporter ATP-binding protein, at 1,589,818 to 1,591,737
_07470
CSW01_07475: CSW01_07475 - glutaredoxin family protein, at 1,591,715 to 1,591,957
_07475
CSW01_07480: CSW01_07480 - ribosomal RNA large subunit methyltransferase K/L, at 1,591,966 to 1,594,092
_07480
CSW01_07485: CSW01_07485 - cell division protein ZapC, at 1,594,552 to 1,595,094
_07485
CSW01_07490: CSW01_07490 - dihydroorotate dehydrogenase (quinone), at 1,595,249 to 1,596,259
_07490
Group
Condition
CSW01
_07470
CSW01
_07475
CSW01
_07480
CSW01
_07485
CSW01
_07490
phage
ICP3_phage_4.1_MOI_rep2
-0.1
-3.2
+0.1
-0.0
-0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.5
-2.4
-0.0
+0.3
-0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-2.0
+0.4
+0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.0
-0.1
+0.2
-1.4
phage
ICP3_phage_4.1_MOI_rep1
-0.0
-1.4
+0.1
-0.2
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
+0.1
-0.1
+0.0
-1.1
phage
ICP3_phage_411_MOI_rep2
+0.3
-1.7
+0.2
+0.4
-0.4
phage
ICP1_phage_2.3_MOI_rep1
-0.2
-1.2
+0.1
+0.6
-0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
+0.6
-0.2
+0.1
-1.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
-0.3
-0.2
-0.2
+0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
+0.5
-0.0
+0.1
-0.9
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
+0.5
-0.1
-0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.1
+0.6
+0.0
+0.0
-0.4
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.3
+0.1
+0.7
-0.5
phage
ICP3_phage_41.1_MOI_rep1
+0.3
-0.8
+0.5
+0.3
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
+0.6
-0.1
+0.1
-0.4
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
+0.6
-0.1
-0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.5
+0.1
+0.5
-0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.2
-0.6
+0.4
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
+0.6
+0.0
-0.3
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.6
-0.0
+0.3
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.2
+0.5
+0.1
+0.5
-0.3
phage
NoPhageControl
+0.1
+0.4
+0.1
+0.3
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.0
+0.9
+0.0
-0.4
+0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.0
+0.8
-0.0
+0.2
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
+0.6
+0.1
-0.2
+0.5
phage
ICP1_phage_0.23_MOI_rep1
+0.0
-0.3
+0.5
+0.9
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
+0.8
+0.0
+0.1
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.5
+0.1
+0.2
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.0
+1.4
-0.0
+0.2
+0.0
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