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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_07245 and CSW01_07250 are separated by 60 nucleotides
CSW01_07250 and CSW01_07255 are separated by 2 nucleotides
CSW01_07255 and CSW01_07260 overlap by 46 nucleotides
CSW01_07260 and CSW01_07265 are separated by 357 nucleotides
CSW01_07245: CSW01_07245 - hybrid sensor histidine kinase/response regulator, at 1,540,204 to 1,541,922
_07245
CSW01_07250: CSW01_07250 - type I secretion system permease/ATPase, at 1,541,983 to 1,544,148
_07250
CSW01_07255: CSW01_07255 - HlyD family type I secretion periplasmic adaptor subunit, at 1,544,151 to 1,545,554
_07255
CSW01_07260: CSW01_07260 - type I secretion system permease/ATPase, at 1,545,509 to 1,547,671
_07260
CSW01_07265: CSW01_07265 - peptide chain release factor 1, at 1,548,029 to 1,548,388
_07265
Group
Condition
CSW01
_07245
CSW01
_07250
CSW01
_07255
CSW01
_07260
CSW01
_07265
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.3
-0.3
+0.1
-0.4
phage
ICP3_phage_411_MOI_rep2
-0.0
-0.3
-0.3
-0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.1
-0.2
-0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.2
-0.2
-0.0
-0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.3
-0.2
+0.0
-0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.1
-0.4
-0.1
+0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.0
-0.1
-0.3
+0.1
+0.0
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.3
-0.1
-0.0
+0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.0
-0.0
-0.2
+0.1
-0.2
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.1
+0.1
+0.2
-0.3
phage
NoPhageControl
+0.1
-0.1
-0.1
+0.0
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
-0.3
-0.2
+0.1
+0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.0
-0.1
-0.2
-0.1
+0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.3
-0.2
+0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.0
-0.1
-0.2
-0.2
+0.5
phage
NoPhageControl
+0.1
+0.1
-0.2
-0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.3
-0.0
+0.0
-0.0
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.3
+0.1
-0.0
-0.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
-0.0
-0.0
-0.1
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.3
-0.0
+0.0
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.3
-0.0
+0.2
-0.0
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.3
+0.1
-0.0
+0.0
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
-0.0
+0.1
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.3
+0.1
+0.0
+0.0
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.2
+0.1
-0.0
+0.1
+0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
+0.2
-0.1
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.1
+0.1
+0.0
+0.1
+0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.3
+0.2
+0.1
-0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.2
+0.1
+0.0
+0.1
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.3
+0.1
+0.2
+0.1
+0.2
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