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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_07075 and CSW01_07080 are separated by 74 nucleotides
CSW01_07080 and CSW01_07085 are separated by 221 nucleotides
CSW01_07085 and CSW01_07090 are separated by 197 nucleotides
CSW01_07090 and CSW01_07095 are separated by 127 nucleotides
CSW01_07075: CSW01_07075 - MFS transporter, at 1,503,043 to 1,504,578
_07075
CSW01_07080: CSW01_07080 - methyl-accepting chemotaxis protein, at 1,504,653 to 1,506,389
_07080
CSW01_07085: CSW01_07085 - carboxypeptidase M32, at 1,506,611 to 1,508,185
_07085
CSW01_07090: CSW01_07090 - type VI secretion system tube protein Hcp, at 1,508,383 to 1,508,901
_07090
CSW01_07095: CSW01_07095 - type VI secretion system tip protein VgrG, at 1,509,029 to 1,512,520
_07095
Group
Condition
CSW01
_07075
CSW01
_07080
CSW01
_07085
CSW01
_07090
CSW01
_07095
phage
ICP1_phage_2.3_MOI_rep2
-0.1
+0.1
-1.7
-1.0
+0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.2
-1.4
-0.5
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.2
-1.6
-0.3
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.1
+0.0
-1.5
-0.4
-0.0
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.2
-1.6
-0.4
-0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.5
+0.1
-1.4
-0.8
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.1
+0.2
-0.7
-0.7
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.3
+0.3
-1.3
-0.4
-0.0
phage
ICP1_phage_0.23_MOI_rep2
+0.1
-0.1
-0.9
+0.1
-0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.1
-0.4
-0.8
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.4
-0.1
-0.0
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.3
-0.1
-0.0
-0.3
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
-0.1
-0.1
-0.1
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.5
+0.0
-0.8
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.4
-0.2
+0.0
-0.1
+0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.2
-1.2
-0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.0
-0.1
-0.2
-0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.4
+0.0
-0.1
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.4
-0.2
-1.3
+0.6
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.1
-0.8
+0.4
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.3
+0.1
-0.0
-0.3
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.3
+0.0
+0.2
-0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.4
-0.0
-0.0
-0.1
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
-0.1
+0.1
-0.2
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.4
-0.0
+0.2
-0.2
+0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.0
-0.8
+0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
-0.0
-0.2
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
-0.1
+0.1
+0.1
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.4
-0.1
+0.2
+0.3
+0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.4
-0.7
+0.1
+0.2
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