Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_06720 and CSW01_06725 are separated by 197 nucleotidesCSW01_06725 and CSW01_06730 are separated by 629 nucleotidesCSW01_06730 and CSW01_06735 overlap by 20 nucleotidesCSW01_06735 and CSW01_06740 are separated by 175 nucleotides CSW01_06720: CSW01_06720 - tripartite tricarboxylate transporter TctB family protein, at 1,415,420 to 1,415,971 _06720 CSW01_06725: CSW01_06725 - tripartite tricarboxylate transporter substrate-binding protein, at 1,416,169 to 1,417,140 _06725 CSW01_06730: CSW01_06730 - GntR family transcriptional regulator, at 1,417,770 to 1,418,477 _06730 CSW01_06735: CSW01_06735 - methylisocitrate lyase, at 1,418,458 to 1,419,384 _06735 CSW01_06740: CSW01_06740 - 2-methylcitrate synthase, at 1,419,560 to 1,420,693 _06740
Group Condition CSW01_06720 CSW01_06725 CSW01_06730 CSW01_06735 CSW01_06740
lb_aerobic LB_Aerobic_18HR_ZN18A -0.2 -0.0 -0.2 +0.0 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.0 -0.2 -0.1 +0.0 -0.2
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -0.3 +0.1 -0.1 +0.1 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A -0.3 -0.0 +0.0 +0.1 -0.1
lb_aerobic LB_Aerobic_180MIN_ZN14B +0.1 +0.0 -0.1 +0.1 -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.1 +0.0 +0.1 +0.1 -0.2
phage ICP1_phage_2.3_MOI_rep2 +0.1 +0.1 +0.1 -0.5 +0.1
phage ICP3_phage_411_MOI_rep1 +0.2 +0.2 -0.0 -0.7 +0.3
phage NoPhageControl -0.0 +0.1 +0.1 -0.2 -0.0
phage ICP3_phage_0.41_MOI_rep1 +0.1 +0.1 -0.1 -0.1 -0.1
phage NoPhageControl -0.1 +0.2 +0.2 -0.2 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12B -0.2 +0.2 -0.1 +0.1 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A +0.1 +0.2 -0.2 +0.2 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -0.2 +0.2 +0.0 +0.1 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.0 +0.1 -0.0 +0.2 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.1 +0.2 -0.0 +0.2 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.1 +0.2 -0.0 +0.2 -0.0
phage ICP1_phage_23.5_MOI_rep1 +0.1 +0.2 +0.2 -0.3 +0.1
phage ICP1_phage_0.23_MOI_rep2 +0.3 -0.0 +0.2 -0.2 +0.1
phage ICP1_phage_0.23_MOI_rep1 +0.1 +0.0 +0.1 -0.0 +0.2
phage ICP1_phage_2.3_MOI_rep1 -0.0 +0.5 +0.2 -0.4 +0.2
phage ICP1_phage_235.3_MOI_rep2 +0.2 +0.3 +0.4 -0.4 -0.1
phage ICP1_phage_23.5_MOI_rep2 -0.1 +0.5 +0.2 -0.3 +0.1
phage ICP3_phage_0.41_MOI_rep2 -0.2 +0.6 +0.3 -0.4 +0.2
phage ICP3_phage_41.1_MOI_rep2 -0.1 +0.2 +0.4 -0.1 +0.1
phage ICP3_phage_4.1_MOI_rep1 +0.3 +0.7 +0.1 -0.5 +0.0
phage ICP3_phage_411_MOI_rep2 +0.4 +0.5 +0.1 -0.5 +0.0
phage ICP1_phage_235.3_MOI_rep1 +0.4 +0.2 +0.4 -0.4 +0.2
phage ICP3_phage_41.1_MOI_rep1 +0.4 +0.3 +0.3 -0.4 +0.1
phage ICP3_phage_4.1_MOI_rep2 +0.3 +0.6 +0.3 -0.4 +0.4
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CSW01_06720
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CSW01_06725
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CSW01_06740
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