Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_06625 and CSW01_06630 are separated by 111 nucleotidesCSW01_06630 and CSW01_06635 are separated by 333 nucleotidesCSW01_06635 and CSW01_06640 are separated by 9 nucleotidesCSW01_06640 and CSW01_06645 overlap by 32 nucleotides CSW01_06625: CSW01_06625 - alanine racemase, at 1,392,474 to 1,393,697 _06625 CSW01_06630: CSW01_06630 - methyl-accepting chemotaxis protein, at 1,393,809 to 1,395,440 _06630 CSW01_06635: CSW01_06635 - transporter, at 1,395,774 to 1,397,237 _06635 CSW01_06640: CSW01_06640 - histidine kinase, at 1,397,247 to 1,398,596 _06640 CSW01_06645: CSW01_06645 - response regulator, at 1,398,565 to 1,399,041 _06645
Group Condition CSW01_06625 CSW01_06630 CSW01_06635 CSW01_06640 CSW01_06645
phage ICP3_phage_411_MOI_rep2 +0.4 -0.1 +0.0 +0.2 -1.2
phage ICP3_phage_0.41_MOI_rep1 -0.1 -0.5 +0.3 +0.1 -0.3
phage ICP3_phage_411_MOI_rep1 -0.1 -0.2 +0.1 +0.3 -0.5
lb_anaerobic LB_Anaerobic_120MIN_ZN12B +0.1 +0.1 -0.2 -0.0 -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20B -0.1 -0.1 -0.2 -0.0 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A -0.2 -0.2 -0.1 -0.1 +0.3
phage ICP1_phage_2.3_MOI_rep2 -0.3 -0.2 +0.2 +0.2 -0.0
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.0 -0.0 -0.1 -0.2 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.1 -0.3 -0.3 +0.0 +0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A -0.1 +0.0 -0.2 +0.1 +0.1
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.0 +0.0 -0.1 -0.2 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.0 +0.1 -0.3 +0.0 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.0 +0.1 -0.3 -0.0 +0.2
phage ICP1_phage_235.3_MOI_rep2 +0.2 -0.5 +0.5 +0.0 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B +0.0 +0.1 -0.2 -0.1 +0.3
phage ICP3_phage_41.1_MOI_rep1 +0.1 +0.1 +0.3 +0.0 -0.5
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.0 -0.1 -0.1 +0.0 +0.3
phage ICP1_phage_23.5_MOI_rep1 +0.3 -0.4 +0.2 +0.1 -0.0
phage ICP3_phage_4.1_MOI_rep2 +0.1 +0.2 +0.1 +0.0 -0.2
phage ICP3_phage_0.41_MOI_rep2 +0.1 -0.3 +0.4 -0.1 +0.2
lb_aerobic LB_Aerobic_18HR_ZN18A +0.0 +0.0 -0.2 -0.0 +0.4
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.0 +0.1 -0.1 +0.1 +0.3
phage ICP1_phage_0.23_MOI_rep1 -0.0 -0.3 +0.4 +0.3 +0.0
phage ICP1_phage_2.3_MOI_rep1 +0.2 -0.4 +0.3 +0.2 +0.2
phage ICP3_phage_4.1_MOI_rep1 +0.2 +0.1 +0.2 +0.2 -0.1
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.0 +0.1 +0.0 +0.1 +0.3
phage ICP1_phage_0.23_MOI_rep2 +0.2 +0.3 +0.3 +0.1 -0.2
phage ICP3_phage_41.1_MOI_rep2 +0.2 -0.1 +0.1 +0.2 +0.4
phage ICP1_phage_235.3_MOI_rep1 +0.1 +0.0 +0.5 +0.3 -0.0
phage ICP1_phage_23.5_MOI_rep2 +0.2 -0.0 +0.2 +0.3 +0.4
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CSW01_06625
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