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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06595 and CSW01_06600 overlap by 4 nucleotides
CSW01_06600 and CSW01_06605 are separated by 113 nucleotides
CSW01_06605 and CSW01_06610 overlap by 1 nucleotides
CSW01_06610 and CSW01_06615 are separated by 94 nucleotides
CSW01_06595: CSW01_06595 - nucleoside triphosphate hydrolase, at 1,386,220 to 1,387,593
_06595
CSW01_06600: CSW01_06600 - TIGR01620 family protein, at 1,387,590 to 1,388,609
_06600
CSW01_06605: CSW01_06605 - transcriptional regulator TyrR, at 1,388,723 to 1,390,264
_06605
CSW01_06610: CSW01_06610 - 30S ribosomal protein S5 alanine N-acetyltransferase, at 1,390,264 to 1,390,839
_06610
CSW01_06615: CSW01_06615 - DUF2947 domain-containing protein, at 1,390,934 to 1,391,407
_06615
Group
Condition
CSW01
_06595
CSW01
_06600
CSW01
_06605
CSW01
_06610
CSW01
_06615
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
+0.0
+0.0
-0.7
-0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.2
-0.1
+0.2
-0.2
-1.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.0
-0.1
+0.1
-0.8
-0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
-0.2
-0.0
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.2
+0.2
-0.3
-0.0
phage
ICP1_phage_2.3_MOI_rep2
+0.0
+0.1
+0.2
-0.5
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
-0.0
-0.1
-0.4
+0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
+0.1
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.2
+0.1
-0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.2
+0.2
-0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.2
-0.0
+0.1
-0.9
+0.5
phage
ICP3_phage_411_MOI_rep1
+0.0
+0.2
+0.0
-0.5
+0.2
phage
NoPhageControl
-0.1
+0.1
+0.0
-0.2
+0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.1
+0.3
-0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.0
+0.1
-0.1
-0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep2
-0.1
+0.3
+0.3
-0.4
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.3
+0.0
-0.1
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
+0.1
-0.1
-0.0
+0.3
phage
NoPhageControl
+0.1
+0.1
+0.0
-0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.2
+0.3
-0.1
-0.3
+0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.0
-0.1
+0.1
+0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.0
-0.1
+0.0
+0.2
+0.4
phage
ICP3_phage_0.41_MOI_rep1
+0.1
+0.2
+0.3
-0.2
+0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.0
+0.0
+0.2
+0.1
+0.4
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.4
+0.2
+0.1
-0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.3
+0.2
+0.2
-0.3
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.2
+0.3
+0.3
-0.2
+0.3
phage
ICP3_phage_4.1_MOI_rep2
+0.3
+0.4
-0.0
+0.3
-0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.2
-0.0
+0.5
+0.3
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.2
+0.0
+0.0
+0.8
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