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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06515 and CSW01_06520 are separated by 138 nucleotides
CSW01_06520 and CSW01_06525 overlap by 4 nucleotides
CSW01_06525 and CSW01_06530 are separated by 280 nucleotides
CSW01_06530 and CSW01_06535 are separated by 211 nucleotides
CSW01_06515: CSW01_06515 - methyl-accepting chemotaxis protein, at 1,365,341 to 1,367,236
_06515
CSW01_06520: CSW01_06520 - 3'-5' exonuclease, at 1,367,375 to 1,368,085
_06520
CSW01_06525: CSW01_06525 - cyclic nucleotide-binding protein, at 1,368,082 to 1,369,995
_06525
CSW01_06530: CSW01_06530 - aromatic amino acid aminotransferase, at 1,370,276 to 1,371,472
_06530
CSW01_06535: CSW01_06535 - hypothetical protein, at 1,371,684 to 1,371,869
_06535
Group
Condition
CSW01
_06515
CSW01
_06520
CSW01
_06525
CSW01
_06530
CSW01
_06535
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.2
-0.6
-0.6
-0.7
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.1
-0.3
-0.9
-0.8
phage
ICP1_phage_2.3_MOI_rep1
+0.4
+0.0
-0.4
-0.6
-1.0
phage
ICP3_phage_0.41_MOI_rep2
+0.0
-0.2
-0.5
-0.7
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.1
-0.6
-0.4
-0.2
+0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.1
-0.3
-0.6
-0.6
phage
NoPhageControl
-0.1
-0.1
-0.2
-0.2
-0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.1
+0.5
-0.5
-0.2
-0.7
phage
ICP1_phage_23.5_MOI_rep1
-0.0
-0.1
-0.3
-0.5
+0.0
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.1
-0.4
-0.4
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.1
-0.1
-0.3
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.3
+0.3
-0.3
-0.4
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.0
-0.1
-0.4
-0.3
+0.3
phage
ICP3_phage_411_MOI_rep1
+0.0
+0.3
-0.2
-0.4
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
+0.2
-0.1
-0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
+0.3
-0.2
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.0
+0.0
+0.0
-0.4
+0.2
phage
ICP3_phage_0.41_MOI_rep1
+0.3
+0.1
-0.2
-0.2
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
+0.4
-0.0
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
+0.4
-0.0
-0.4
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
+0.2
+0.3
-0.6
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.3
+0.0
-0.5
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.2
-0.1
-0.2
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
+0.1
+0.4
-0.6
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
+0.2
-0.0
-0.3
+0.4
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.3
-0.2
+0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
+0.2
-0.1
-0.3
+0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
+0.3
-0.0
-0.0
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.0
+0.4
+0.1
+0.1
+0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.0
+0.4
-0.0
+0.2
+0.5
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