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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06405 and CSW01_06410 are separated by 145 nucleotides
CSW01_06410 and CSW01_06415 are separated by 63 nucleotides
CSW01_06415 and CSW01_06420 overlap by 7 nucleotides
CSW01_06420 and CSW01_06425 are separated by 103 nucleotides
CSW01_06405: CSW01_06405 - murein L,D-transpeptidase, at 1,341,776 to 1,343,350
_06405
CSW01_06410: CSW01_06410 - hypothetical protein, at 1,343,496 to 1,344,044
_06410
CSW01_06415: CSW01_06415 - MBL fold metallo-hydrolase, at 1,344,108 to 1,344,764
_06415
CSW01_06420: CSW01_06420 - DUF2982 domain-containing protein, at 1,344,758 to 1,345,474
_06420
CSW01_06425: CSW01_06425 - hypothetical protein, at 1,345,578 to 1,346,003
_06425
Group
Condition
CSW01
_06405
CSW01
_06410
CSW01
_06415
CSW01
_06420
CSW01
_06425
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.7
-0.0
-0.8
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
-0.3
-0.4
-0.4
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.5
-0.0
-0.3
-0.4
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.1
-0.4
-0.4
-0.3
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-0.1
-0.5
-0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
+0.2
-0.6
-0.5
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
+0.2
-0.6
-0.4
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
-0.0
-0.4
-0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.6
-0.0
+0.2
-0.2
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.2
-0.0
-0.5
-0.2
+0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.1
-0.2
-0.6
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.0
-0.4
-0.3
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
-0.2
-0.1
-0.5
+0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.2
-0.6
+0.3
-0.3
phage
ICP3_phage_4.1_MOI_rep2
+0.0
-0.5
+0.3
+0.2
-0.3
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.7
+0.5
-0.1
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
-0.4
-0.0
-0.3
+0.4
phage
ICP1_phage_2.3_MOI_rep1
+0.1
-0.1
+0.4
-0.6
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.0
-0.1
+0.4
-0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.2
+0.5
-0.2
-0.2
-0.2
phage
NoPhageControl
-0.1
+0.2
+0.3
-0.3
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.3
+0.4
+0.6
+0.2
-0.5
phage
ICP3_phage_411_MOI_rep1
-0.4
+0.0
+0.2
+0.5
+0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.1
+0.9
-0.4
+0.4
-0.4
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.4
+0.9
+0.2
+0.0
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.6
+0.9
+0.2
+0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.0
+0.7
+0.2
+0.4
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
-0.4
+0.6
+0.0
+0.5
phage
ICP3_phage_41.1_MOI_rep2
-0.1
+0.2
+0.2
+0.5
+0.3
phage
ICP3_phage_411_MOI_rep2
+0.1
-0.0
+0.7
+0.4
+0.0
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