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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06365 and CSW01_06370 are separated by 250 nucleotides
CSW01_06370 and CSW01_06375 are separated by 182 nucleotides
CSW01_06375 and CSW01_06380 are separated by 170 nucleotides
CSW01_06380 and CSW01_06385 are separated by 134 nucleotides
CSW01_06365: CSW01_06365 - AraC family transcriptional regulator, at 1,332,871 to 1,333,770
_06365
CSW01_06370: CSW01_06370 - sugar efflux transporter SetB, at 1,334,021 to 1,335,235
_06370
CSW01_06375: CSW01_06375 - hypothetical protein, at 1,335,418 to 1,335,594
_06375
CSW01_06380: CSW01_06380 - GTP cyclohydrolase II, at 1,335,765 to 1,336,415
_06380
CSW01_06385: CSW01_06385 - peptidase, at 1,336,550 to 1,337,857
_06385
Group
Condition
CSW01
_06365
CSW01
_06370
CSW01
_06375
CSW01
_06380
CSW01
_06385
phage
NoPhageControl
-0.2
-0.2
+0.0
-4.8
-0.2
phage
NoPhageControl
-0.0
+0.1
-0.4
-4.7
-0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.0
-0.4
-0.7
-3.0
-0.7
phage
ICP3_phage_4.1_MOI_rep2
-0.4
-0.1
-0.2
-3.4
-0.6
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.6
+0.2
-3.3
-1.2
phage
ICP3_phage_4.1_MOI_rep1
-0.6
-0.1
+0.3
-3.2
-0.9
phage
ICP3_phage_41.1_MOI_rep1
+0.2
-0.2
-0.0
-3.4
-1.1
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.1
-0.0
-3.4
-0.8
phage
ICP1_phage_2.3_MOI_rep2
-0.5
-0.4
+0.7
-3.0
-0.7
phage
ICP1_phage_23.5_MOI_rep2
-0.5
-0.1
+0.7
-3.3
-0.5
phage
ICP3_phage_411_MOI_rep1
-0.2
-0.5
+0.8
-3.2
-0.7
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.3
+0.4
-3.2
-0.5
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.1
+0.1
-3.3
-0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.3
+0.4
-3.2
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.2
-0.3
+0.8
-3.2
-0.5
phage
ICP3_phage_0.41_MOI_rep1
-0.1
-0.3
+0.5
-2.9
-0.6
phage
ICP1_phage_235.3_MOI_rep2
+0.3
-0.2
-0.1
-2.8
-0.6
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.1
+1.0
-3.2
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
-0.0
+0.6
+0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
-0.0
+1.0
-0.2
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.0
+0.7
+0.3
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.1
+0.7
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
+0.0
+0.3
+0.5
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.2
+0.0
+0.6
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.3
-0.2
+0.3
+0.4
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
-0.1
+0.3
+0.7
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.0
+0.6
+0.5
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.2
-0.1
+1.0
+0.4
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.4
+0.0
+1.0
+0.9
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
-0.0
+0.7
+1.2
+0.0
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