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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06235 and CSW01_06240 are separated by 16 nucleotides
CSW01_06240 and CSW01_06245 are separated by 145 nucleotides
CSW01_06245 and CSW01_06250 are separated by 303 nucleotides
CSW01_06250 and CSW01_06255 are separated by 29 nucleotides
CSW01_06235: CSW01_06235 - hypothetical protein, at 1,305,525 to 1,305,914
_06235
CSW01_06240: CSW01_06240 - exodeoxyribonuclease I, at 1,305,931 to 1,307,355
_06240
CSW01_06245: CSW01_06245 - L-cystine transporter, at 1,307,501 to 1,308,916
_06245
CSW01_06250: CSW01_06250 - peptide-methionine (R)-S-oxide reductase, at 1,309,220 to 1,309,666
_06250
CSW01_06255: CSW01_06255 - hypothetical protein, at 1,309,696 to 1,309,923
_06255
Group
Condition
CSW01
_06235
CSW01
_06240
CSW01
_06245
CSW01
_06250
CSW01
_06255
phage
ICP1_phage_2.3_MOI_rep2
-1.9
+0.1
-0.0
+0.2
+0.6
phage
ICP3_phage_411_MOI_rep2
-1.8
-0.2
+0.2
-0.1
+0.9
phage
ICP3_phage_0.41_MOI_rep1
-0.9
-0.1
-0.0
+0.2
+0.4
phage
ICP3_phage_41.1_MOI_rep2
-0.2
-0.2
-0.0
-0.2
+0.4
phage
ICP1_phage_235.3_MOI_rep2
-0.7
+0.2
+0.1
+0.0
+0.4
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.2
-0.3
+0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.3
-0.4
-0.0
+0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.3
-0.2
+0.0
+0.1
-0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.4
-0.2
-0.1
-0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.4
-0.1
-0.1
+0.0
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
-0.4
+0.2
+0.0
+0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.4
-0.0
+0.0
+0.1
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.3
-0.4
+0.1
+0.1
+0.3
phage
ICP1_phage_23.5_MOI_rep1
+0.0
-0.1
+0.1
-0.1
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.3
-0.0
-0.0
-0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.3
-0.2
+0.0
+0.1
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.3
-0.1
+0.0
+0.1
+0.2
phage
NoPhageControl
+0.5
-0.1
+0.1
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.7
-0.3
+0.1
+0.1
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.6
-0.1
-0.0
-0.0
+0.3
phage
ICP1_phage_0.23_MOI_rep1
+0.3
-0.4
-0.3
+0.2
+0.8
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.6
-0.3
-0.0
+0.2
+0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.4
-0.2
-0.2
-0.2
+0.9
phage
ICP3_phage_41.1_MOI_rep1
+0.1
+0.1
-0.2
-0.0
+0.8
phage
ICP3_phage_411_MOI_rep1
+0.4
-0.3
+0.1
+0.4
+0.3
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.0
-0.0
-0.0
+1.1
phage
ICP1_phage_0.23_MOI_rep2
+0.7
+0.1
+0.2
+0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.7
-0.1
+0.1
+0.2
+0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.8
-0.1
+0.0
+0.2
+0.4
phage
ICP1_phage_2.3_MOI_rep1
+0.6
-0.1
-0.0
+0.3
+0.9
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