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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06170 and CSW01_06175 overlap by 4 nucleotides
CSW01_06175 and CSW01_06180 are separated by 290 nucleotides
CSW01_06180 and CSW01_06185 are separated by 26 nucleotides
CSW01_06185 and CSW01_06190 are separated by 438 nucleotides
CSW01_06170: CSW01_06170 - GGDEF domain-containing protein, at 1,293,291 to 1,294,409
_06170
CSW01_06175: CSW01_06175 - N-acetyltransferase, at 1,294,406 to 1,294,891
_06175
CSW01_06180: CSW01_06180 - phenylalanine--tRNA ligase subunit alpha, at 1,295,182 to 1,296,165
_06180
CSW01_06185: CSW01_06185 - phenylalanine--tRNA ligase subunit beta, at 1,296,192 to 1,298,579
_06185
CSW01_06190: CSW01_06190 - integration host factor subunit alpha, at 1,299,018 to 1,299,314
_06190
Group
Condition
CSW01
_06170
CSW01
_06175
CSW01
_06180
CSW01
_06185
CSW01
_06190
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.4
-0.2
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-0.3
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.3
+0.0
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
-0.2
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.2
N.D.
N.D.
N.D.
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.0
-0.2
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.0
-0.3
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.1
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
-0.2
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
-0.0
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
+0.3
-0.5
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.2
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.3
+0.1
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-0.2
+0.1
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.3
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
+0.1
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.2
+0.2
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.3
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.3
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.2
+0.0
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep1
+0.2
+0.0
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.4
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.3
-0.0
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep2
+0.2
+0.1
N.D.
N.D.
N.D.
phage
NoPhageControl
+0.0
+0.3
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.1
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep2
+0.2
+0.1
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.3
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.3
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.5
N.D.
N.D.
N.D.
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