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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06100 and CSW01_06105 are separated by 116 nucleotides
CSW01_06105 and CSW01_06110 are separated by 138 nucleotides
CSW01_06110 and CSW01_06115 are separated by 4 nucleotides
CSW01_06115 and CSW01_06120 are separated by 191 nucleotides
CSW01_06100: CSW01_06100 - histidine utilization repressor, at 1,280,608 to 1,281,318
_06100
CSW01_06105: CSW01_06105 - DUF3187 domain-containing protein, at 1,281,435 to 1,282,382
_06105
CSW01_06110: CSW01_06110 - dsDNA-mimic protein, at 1,282,521 to 1,282,841
_06110
CSW01_06115: CSW01_06115 - elongation factor P-like protein YeiP, at 1,282,846 to 1,283,412
_06115
CSW01_06120: CSW01_06120 - nucleotidyltransferase, at 1,283,604 to 1,284,398
_06120
Group
Condition
CSW01
_06100
CSW01
_06105
CSW01
_06110
CSW01
_06115
CSW01
_06120
phage
ICP1_phage_23.5_MOI_rep2
-0.4
+0.1
+0.2
-0.3
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.7
+0.1
+0.3
+0.1
-0.4
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.1
-0.0
-0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
-0.1
-0.1
-0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.1
+0.2
+0.2
-0.3
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.4
+0.0
+0.3
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.0
-0.0
-0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
+0.1
+0.0
-0.2
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
-0.0
-0.0
-0.2
+0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.1
+0.3
-0.1
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.2
-0.1
-0.1
+0.1
phage
NoPhageControl
-0.2
+0.0
+0.1
+0.1
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.1
+0.3
+0.4
-0.7
+0.2
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.1
+0.4
-0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
+0.1
-0.2
-0.2
+0.4
phage
NoPhageControl
-0.1
+0.1
+0.3
-0.0
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.3
+0.4
+0.4
+0.2
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.2
+0.2
-0.0
-0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.1
+0.5
-0.0
-0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.0
+0.3
+0.2
-0.3
+0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.2
+0.3
+0.3
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
+0.0
+0.2
+0.1
+0.2
phage
ICP3_phage_411_MOI_rep2
+0.2
+0.2
+0.5
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
+0.2
-0.0
-0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.0
+0.1
+0.2
+0.0
+0.3
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.1
+0.3
+0.2
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.1
+0.4
-0.2
+0.3
phage
ICP1_phage_0.23_MOI_rep2
+0.0
-0.0
+0.3
+0.3
+0.4
phage
ICP3_phage_41.1_MOI_rep1
+0.1
+0.2
+0.3
+0.4
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.4
+0.3
+0.0
+0.2
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