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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06080 and CSW01_06085 are separated by 11 nucleotides
CSW01_06085 and CSW01_06090 are separated by 18 nucleotides
CSW01_06090 and CSW01_06095 overlap by 11 nucleotides
CSW01_06095 and CSW01_06100 are separated by 103 nucleotides
CSW01_06080: CSW01_06080 - histidine ammonia-lyase, at 1,275,033 to 1,276,568
_06080
CSW01_06085: CSW01_06085 - urocanate hydratase, at 1,276,580 to 1,278,277
_06085
CSW01_06090: CSW01_06090 - formimidoylglutamase, at 1,278,296 to 1,279,306
_06090
CSW01_06095: CSW01_06095 - imidazolonepropionase, at 1,279,296 to 1,280,504
_06095
CSW01_06100: CSW01_06100 - histidine utilization repressor, at 1,280,608 to 1,281,318
_06100
Group
Condition
CSW01
_06080
CSW01
_06085
CSW01
_06090
CSW01
_06095
CSW01
_06100
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.1
+0.0
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.0
-0.0
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.1
-0.3
+0.2
+0.1
-0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
-0.1
+0.1
-0.4
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.1
+0.2
+0.1
+0.0
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
-0.2
+0.1
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
-0.1
+0.2
-0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.0
-0.2
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.1
+0.2
-0.4
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.1
-0.1
-0.0
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.2
-0.1
+0.1
-0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
-0.1
+0.2
-0.0
-0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.3
+0.1
+0.4
-0.2
-0.4
phage
ICP3_phage_41.1_MOI_rep1
-0.2
+0.1
+0.4
-0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.2
-0.1
+0.1
-0.0
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
-0.1
+0.1
-0.0
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
-0.1
+0.3
-0.1
+0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.1
+0.3
+0.3
-0.2
-0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.1
+0.6
+0.4
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.4
+0.6
+0.1
-0.3
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.2
+0.5
-0.2
+0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.5
+0.4
-0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.1
+0.2
+0.4
+0.4
-0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.6
+0.3
+0.3
-0.3
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.2
+0.6
+0.6
-0.4
+0.0
phage
ICP3_phage_0.41_MOI_rep2
+0.2
+0.3
+0.4
+0.2
+0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.3
+0.4
+0.6
-0.1
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.1
+0.3
+0.6
+0.3
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.4
+0.2
+0.6
+0.0
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.6
+0.4
+0.5
+0.2
+0.0
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