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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_06000 and CSW01_06005 are separated by 100 nucleotides
CSW01_06005 and CSW01_06010 overlap by 28 nucleotides
CSW01_06010 and CSW01_06015 are separated by 3 nucleotides
CSW01_06015 and CSW01_06020 are separated by 393 nucleotides
CSW01_06000: CSW01_06000 - GGDEF domain-containing protein, at 1,257,931 to 1,259,262
_06000
CSW01_06005: CSW01_06005 - vancomycin high temperature exclusion protein, at 1,259,363 to 1,260,127
_06005
CSW01_06010: CSW01_06010 - DUF3392 domain-containing protein, at 1,260,100 to 1,260,468
_06010
CSW01_06015: CSW01_06015 - NAD-dependent malic enzyme, at 1,260,472 to 1,262,160
_06015
CSW01_06020: CSW01_06020 - transporter, at 1,262,554 to 1,262,976
_06020
Group
Condition
CSW01
_06000
CSW01
_06005
CSW01
_06010
CSW01
_06015
CSW01
_06020
phage
ICP1_phage_2.3_MOI_rep1
+0.2
-1.0
-0.2
-0.5
-0.8
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.5
-0.0
-0.8
-1.1
phage
ICP1_phage_0.23_MOI_rep2
+0.3
-0.7
-0.1
-1.0
-0.5
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.4
+0.2
-0.7
-0.5
phage
ICP1_phage_0.23_MOI_rep1
-0.0
+0.4
-0.7
-1.0
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-1.2
+0.1
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
-0.2
-0.2
-0.9
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
-0.2
-0.1
-0.9
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.3
+0.3
-0.5
-0.4
phage
ICP1_phage_23.5_MOI_rep1
+0.3
+0.1
-0.2
-0.3
-0.5
phage
ICP3_phage_41.1_MOI_rep1
-0.3
-0.1
+0.5
-0.2
-0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
-0.3
+0.1
-1.0
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.2
-0.1
-0.1
-0.6
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.1
-0.1
+0.1
-0.9
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.3
-0.3
+0.1
-0.7
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.3
-0.4
-0.2
-0.2
+0.1
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.0
+0.1
-0.3
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.2
-0.6
-0.2
-0.1
+0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.3
+0.0
-0.4
-0.6
+0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.3
-0.0
-0.0
-0.4
-0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.2
-0.6
+0.0
-0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.2
+0.5
+0.1
-0.9
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
-0.3
-0.1
-0.3
+0.3
phage
ICP1_phage_23.5_MOI_rep2
+0.3
-0.1
+0.3
-0.1
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.3
+0.2
-0.3
+0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.3
+0.3
-0.2
-0.5
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.3
-0.2
-0.1
-0.1
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.3
-0.4
+0.1
-0.1
+0.5
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.4
+0.7
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.3
-0.2
+0.1
+0.1
+0.4
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