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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05985 and CSW01_05990 are separated by 474 nucleotides
CSW01_05990 and CSW01_05995 overlap by 26 nucleotides
CSW01_05995 and CSW01_06000 are separated by 257 nucleotides
CSW01_06000 and CSW01_06005 are separated by 100 nucleotides
CSW01_05985: CSW01_05985 - thioredoxin-disulfide reductase, at 1,254,358 to 1,255,314
_05985
CSW01_05990: CSW01_05990 - agglutination protein, at 1,255,789 to 1,256,448
_05990
CSW01_05995: CSW01_05995 - cysteine desulfurase-like protein, at 1,256,423 to 1,257,673
_05995
CSW01_06000: CSW01_06000 - GGDEF domain-containing protein, at 1,257,931 to 1,259,262
_06000
CSW01_06005: CSW01_06005 - vancomycin high temperature exclusion protein, at 1,259,363 to 1,260,127
_06005
Group
Condition
CSW01
_05985
CSW01
_05990
CSW01
_05995
CSW01
_06000
CSW01
_06005
phage
ICP3_phage_411_MOI_rep1
-0.0
-1.4
-0.7
+0.1
-0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.9
-1.6
+0.1
+0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep1
-0.2
-0.5
-0.1
+0.2
-1.0
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.5
-0.1
+0.2
-1.2
phage
ICP3_phage_4.1_MOI_rep1
-0.7
-0.5
+0.0
+0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.5
-0.1
-0.3
+0.2
-0.4
phage
ICP1_phage_0.23_MOI_rep2
-1.0
+0.4
-0.0
+0.3
-0.7
phage
ICP3_phage_0.41_MOI_rep1
-0.8
+0.1
+0.3
-0.2
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
-0.2
-0.1
+0.2
-0.6
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.4
-0.5
+0.2
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
-0.4
-0.2
+0.3
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.4
-0.4
-0.2
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.3
-0.3
+0.1
-0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.0
-0.1
-0.3
+0.2
-0.6
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
-0.4
-0.1
+0.2
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.3
-0.2
+0.1
+0.2
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.2
+0.0
+0.3
-0.4
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.3
-0.1
+0.2
-0.5
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.3
-0.6
-0.0
+0.2
-0.2
phage
NoPhageControl
-0.4
-0.2
+0.1
+0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.3
-0.4
+0.0
+0.3
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
-0.4
+0.1
+0.3
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.4
+0.2
+0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.3
-0.5
+0.0
+0.2
-0.0
phage
NoPhageControl
-0.6
+0.2
+0.1
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.3
-0.2
+0.0
+0.4
-0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.3
+0.1
+0.2
+0.3
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.2
+0.7
-0.2
-0.0
+0.4
phage
ICP1_phage_2.3_MOI_rep2
+0.3
+0.3
-0.3
+0.3
-0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
+0.3
+0.2
+0.5
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