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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05930 and CSW01_05935 are separated by 40 nucleotides
CSW01_05935 and CSW01_05940 are separated by 5 nucleotides
CSW01_05940 and CSW01_05945 are separated by 20 nucleotides
CSW01_05945 and CSW01_05950 overlap by 4 nucleotides
CSW01_05930: CSW01_05930 - tryptophan synthase subunit beta, at 1,241,796 to 1,242,986
_05930
CSW01_05935: CSW01_05935 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase, at 1,243,027 to 1,244,436
_05935
CSW01_05940: CSW01_05940 - anthranilate phosphoribosyltransferase, at 1,244,442 to 1,245,440
_05940
CSW01_05945: CSW01_05945 - type 1 glutamine amidotransferase, at 1,245,461 to 1,246,072
_05945
CSW01_05950: CSW01_05950 - anthranilate synthase component I, at 1,246,069 to 1,247,640
_05950
Group
Condition
CSW01
_05930
CSW01
_05935
CSW01
_05940
CSW01
_05945
CSW01
_05950
phage
ICP1_phage_2.3_MOI_rep2
-0.4
-0.7
-0.7
-0.9
-0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.6
-0.9
-0.2
-0.4
-0.4
phage
NoPhageControl
-0.5
-0.6
-0.3
-0.5
-0.5
phage
ICP1_phage_0.23_MOI_rep1
-0.3
+0.0
-0.6
-0.8
-0.5
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.5
-0.3
-0.4
-0.8
phage
ICP1_phage_2.3_MOI_rep1
-0.3
-0.2
-0.7
-0.2
-0.7
phage
ICP3_phage_41.1_MOI_rep1
-0.5
-0.5
-0.4
-0.2
-0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.2
-0.6
-0.3
-0.4
-0.6
phage
ICP3_phage_41.1_MOI_rep2
-0.0
-0.7
-0.5
-0.4
-0.5
phage
ICP3_phage_411_MOI_rep2
-0.3
-0.3
-0.3
-0.5
-0.6
phage
NoPhageControl
-0.5
-0.6
-0.2
-0.1
-0.4
phage
ICP1_phage_235.3_MOI_rep2
-0.4
-0.6
-0.5
+0.1
-0.5
phage
ICP3_phage_411_MOI_rep1
-0.3
-0.3
-0.3
-0.1
-0.5
phage
ICP3_phage_4.1_MOI_rep1
-0.3
-0.6
-0.4
+0.3
-0.5
phage
ICP1_phage_23.5_MOI_rep1
-0.4
-0.4
-0.1
-0.2
-0.3
phage
ICP3_phage_0.41_MOI_rep2
-0.5
-0.2
-0.3
-0.0
-0.4
phage
ICP1_phage_23.5_MOI_rep2
-0.3
-0.3
-0.4
+0.1
-0.4
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.3
-0.4
+0.2
-0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.3
+0.1
-0.5
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
+0.1
-0.1
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
+0.3
-0.1
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.0
-0.1
-0.2
+0.2
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
+0.5
-0.0
+0.0
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.0
+0.3
-0.0
+0.3
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
+0.1
+0.0
+0.4
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
+0.1
+0.1
+0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
+0.2
+0.1
+0.5
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
+0.5
-0.0
+0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
+0.5
+0.2
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.1
+0.0
+0.5
+0.1
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