Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_05875 and CSW01_05880 are separated by 80 nucleotidesCSW01_05880 and CSW01_05885 overlap by 1 nucleotidesCSW01_05885 and CSW01_05890 are separated by 8 nucleotidesCSW01_05890 and CSW01_05895 are separated by 433 nucleotides CSW01_05875: CSW01_05875 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 1,229,174 to 1,230,313 _05875 CSW01_05880: CSW01_05880 - alpha-L-glutamate ligase-like protein, at 1,230,394 to 1,231,383 _05880 CSW01_05885: CSW01_05885 - gonadoliberin III, at 1,231,383 to 1,232,891 _05885 CSW01_05890: CSW01_05890 - hypothetical protein, at 1,232,900 to 1,233,322 _05890 CSW01_05895: CSW01_05895 - tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB, at 1,233,756 to 1,234,727 _05895
Group Condition CSW01_05875 CSW01_05880 CSW01_05885 CSW01_05890 CSW01_05895
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B N.D. -0.7 -0.5 -0.9 -0.3
lb_aerobic LB_Aerobic_18HR_ZN18A N.D. -0.4 -0.5 -0.8 -0.2
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A N.D. -0.4 -0.6 -0.9 +0.1
phage ICP1_phage_2.3_MOI_rep1 N.D. -0.5 -0.2 -0.7 -0.4
phage ICP3_phage_411_MOI_rep1 N.D. -0.4 -0.2 -0.2 -0.6
phage ICP1_phage_235.3_MOI_rep2 N.D. -0.8 -0.2 +0.1 -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B N.D. -0.4 -0.3 -0.7 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B N.D. -0.4 -0.3 -0.5 +0.1
phage ICP3_phage_4.1_MOI_rep2 N.D. -0.5 -0.1 -0.3 -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20A N.D. -0.3 -0.2 -0.7 +0.1
phage ICP3_phage_0.41_MOI_rep2 N.D. -0.1 -0.3 -0.4 -0.0
phage ICP1_phage_0.23_MOI_rep2 N.D. -0.3 -0.4 -0.0 -0.1
phage ICP3_phage_4.1_MOI_rep1 N.D. +0.2 -0.1 -0.5 -0.5
lb_anaerobic LB_Anaerobic_60MIN_ZN4B N.D. -0.2 +0.1 -0.3 -0.2
phage ICP1_phage_23.5_MOI_rep2 N.D. +0.0 +0.1 -0.5 -0.2
phage ICP3_phage_0.41_MOI_rep1 N.D. -0.3 -0.4 +0.2 -0.0
phage ICP3_phage_41.1_MOI_rep1 N.D. -0.4 -0.0 +0.1 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B N.D. +0.1 -0.0 -0.7 +0.2
phage ICP3_phage_41.1_MOI_rep2 N.D. -0.3 -0.1 -0.2 +0.1
phage ICP1_phage_235.3_MOI_rep1 N.D. -0.2 -0.0 +0.1 -0.2
phage ICP1_phage_23.5_MOI_rep1 N.D. -0.3 -0.0 +0.4 -0.3
phage ICP1_phage_2.3_MOI_rep2 N.D. +0.1 -0.2 -0.3 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A N.D. +0.1 +0.0 -0.4 +0.1
phage ICP1_phage_0.23_MOI_rep1 N.D. -0.4 -0.1 +0.5 -0.2
lb_anaerobic LB_Anaerobic_120MIN_ZN12B N.D. +0.2 +0.2 -0.5 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B N.D. +0.2 +0.0 -0.3 +0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A N.D. +0.3 +0.2 -0.3 -0.0
phage NoPhageControl N.D. +0.3 -0.2 +0.2 -0.1
lb_aerobic LB_Aerobic_60MIN_ZN2B N.D. +0.1 +0.3 -0.4 +0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A N.D. +0.0 +0.1 -0.2 +0.3
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CSW01_05875
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