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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05855 and CSW01_05860 are separated by 190 nucleotides
CSW01_05860 and CSW01_05865 overlap by 52 nucleotides
CSW01_05865 and CSW01_05870 are separated by 222 nucleotides
CSW01_05870 and CSW01_05875 are separated by 76 nucleotides
CSW01_05855: CSW01_05855 - hypothetical protein, at 1,224,421 to 1,224,969
_05855
CSW01_05860: CSW01_05860 - response regulator, at 1,225,160 to 1,225,705
_05860
CSW01_05865: CSW01_05865 - ATPase, at 1,225,654 to 1,227,609
_05865
CSW01_05870: CSW01_05870 - DUF945 domain-containing protein, at 1,227,832 to 1,229,097
_05870
CSW01_05875: CSW01_05875 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 1,229,174 to 1,230,313
_05875
Group
Condition
CSW01
_05855
CSW01
_05860
CSW01
_05865
CSW01
_05870
CSW01
_05875
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-1.3
-0.0
+0.0
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-1.3
+0.1
-0.0
-0.1
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.7
-0.3
+0.0
+0.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
-0.1
-0.0
-0.1
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.6
+0.1
+0.1
+0.1
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.3
+0.1
+0.1
-0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.1
+0.1
-0.2
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.0
+0.1
-0.2
N.D.
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.2
+0.1
+0.0
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.2
-0.1
-0.1
+0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
+0.4
+0.0
-0.3
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.3
-0.0
+0.1
+0.1
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.3
+0.1
+0.1
+0.0
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.4
+0.1
+0.1
+0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.0
-0.1
+0.2
-0.2
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.2
+0.0
-0.1
+0.2
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.3
+0.1
-0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
+0.2
+0.0
+0.2
N.D.
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.6
+0.3
+0.1
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.2
+0.1
+0.0
+0.2
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.2
-0.0
+0.2
+0.2
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
+0.2
+0.2
-0.1
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
+0.5
+0.0
-0.0
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
+0.2
+0.1
-0.1
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.1
-0.0
+0.3
+0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
+0.5
+0.1
+0.0
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-0.2
+0.4
+0.3
+0.2
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.6
+0.1
+0.3
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.2
+0.8
+0.0
+0.1
N.D.
phage
ICP3_phage_4.1_MOI_rep1
+0.5
+0.4
+0.2
+0.1
N.D.
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