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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05825 and CSW01_05830 are separated by 307 nucleotides
CSW01_05830 and CSW01_05835 are separated by 109 nucleotides
CSW01_05835 and CSW01_05840 are separated by 188 nucleotides
CSW01_05840 and CSW01_05845 are separated by 20 nucleotides
CSW01_05825: CSW01_05825 - transcriptional regulator HexR, at 1,217,898 to 1,218,752
_05825
CSW01_05830: CSW01_05830 - putative pyridoxal-dependent aspartate 1-decarboxylase, at 1,219,060 to 1,220,706
_05830
CSW01_05835: CSW01_05835 - hypothetical protein, at 1,220,816 to 1,221,325
_05835
CSW01_05840: CSW01_05840 - DUF340 domain-containing protein, at 1,221,514 to 1,222,419
_05840
CSW01_05845: CSW01_05845 - HDOD domain-containing protein, at 1,222,440 to 1,223,375
_05845
Group
Condition
CSW01
_05825
CSW01
_05830
CSW01
_05835
CSW01
_05840
CSW01
_05845
phage
ICP1_phage_2.3_MOI_rep1
-2.1
N.D.
+0.2
+0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-1.1
N.D.
-0.2
-0.1
-0.4
phage
ICP1_phage_0.23_MOI_rep2
-0.7
N.D.
-0.4
+0.1
-0.8
phage
ICP3_phage_411_MOI_rep2
-1.6
N.D.
-0.2
+0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-1.1
N.D.
-0.0
+0.0
-0.6
phage
ICP1_phage_23.5_MOI_rep1
-0.7
N.D.
-0.6
+0.4
-0.5
phage
ICP1_phage_23.5_MOI_rep2
-0.6
N.D.
+0.0
-0.0
-0.7
phage
ICP1_phage_235.3_MOI_rep1
-0.8
N.D.
+0.1
-0.2
-0.3
phage
ICP1_phage_2.3_MOI_rep2
-0.8
N.D.
-0.1
-0.2
-0.1
phage
ICP3_phage_411_MOI_rep1
-1.0
N.D.
+0.0
+0.2
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.8
N.D.
+0.1
-0.2
-0.1
phage
NoPhageControl
-0.5
N.D.
+0.1
-0.2
-0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.7
N.D.
-0.1
+0.3
-0.3
phage
ICP3_phage_4.1_MOI_rep1
-0.7
N.D.
+0.2
-0.0
-0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.5
N.D.
+0.1
+0.1
-0.4
phage
ICP3_phage_0.41_MOI_rep2
-0.5
N.D.
+0.1
-0.2
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
N.D.
-0.3
+0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.5
N.D.
+0.1
+0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.5
N.D.
-0.1
+0.3
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.3
N.D.
-0.3
+0.4
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
N.D.
-0.1
+0.3
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
N.D.
-0.2
+0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
N.D.
-0.1
+0.2
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.2
N.D.
-0.2
+0.2
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
N.D.
-0.1
+0.2
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.3
N.D.
+0.0
+0.2
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
N.D.
+0.0
+0.2
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
N.D.
+0.1
+0.2
+0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
N.D.
+0.2
+0.1
+0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
N.D.
-0.1
+0.4
+0.3
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