Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_05775 and CSW01_05780 overlap by 4 nucleotidesCSW01_05780 and CSW01_05785 are separated by 200 nucleotidesCSW01_05785 and CSW01_05790 are separated by 307 nucleotidesCSW01_05790 and CSW01_05795 are separated by 98 nucleotides CSW01_05775: CSW01_05775 - imidazole glycerol phosphate synthase cyclase subunit, at 1,205,758 to 1,206,531 _05775 CSW01_05780: CSW01_05780 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase, at 1,206,528 to 1,207,160 _05780 CSW01_05785: CSW01_05785 - 23S rRNA pseudouridine synthase E, at 1,207,361 to 1,208,086 _05785 CSW01_05790: CSW01_05790 - isocitrate dehydrogenase (NADP(+)), at 1,208,394 to 1,210,619 _05790 CSW01_05795: CSW01_05795 - cold-shock protein CspD, at 1,210,718 to 1,210,948 _05795
Group Condition CSW01_05775 CSW01_05780 CSW01_05785 CSW01_05790 CSW01_05795
phage ICP3_phage_0.41_MOI_rep1 +0.0 -0.6 -0.3 N.D. -0.5
phage ICP1_phage_0.23_MOI_rep2 -0.5 -0.2 +0.2 N.D. -0.5
phage ICP1_phage_0.23_MOI_rep1 -0.3 +0.3 -0.3 N.D. -0.3
phage ICP3_phage_411_MOI_rep1 -0.4 -0.1 +0.1 N.D. +0.1
phage ICP1_phage_235.3_MOI_rep1 -0.3 -0.1 +0.2 N.D. -0.1
phage ICP3_phage_0.41_MOI_rep2 +0.1 -0.1 +0.1 N.D. -0.3
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.1 -0.3 +0.3 N.D. -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.1 -0.3 +0.3 N.D. -0.2
phage ICP1_phage_23.5_MOI_rep1 -0.1 -0.0 +0.4 N.D. -0.3
phage ICP1_phage_23.5_MOI_rep2 -0.5 +0.2 +0.4 N.D. -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12B +0.2 -0.4 +0.1 N.D. -0.0
lb_aerobic LB_Aerobic_120MIN_ZN10B +0.3 -0.0 +0.1 N.D. -0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.2 -0.2 +0.2 N.D. -0.1
phage ICP1_phage_2.3_MOI_rep2 +0.0 -0.3 +0.2 N.D. +0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.2 -0.0 +0.2 N.D. -0.2
phage ICP3_phage_41.1_MOI_rep2 +0.0 -0.2 -0.0 N.D. +0.4
phage ICP3_phage_4.1_MOI_rep1 -0.2 +0.4 -0.1 N.D. +0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.2 -0.1 +0.2 N.D. -0.1
phage ICP3_phage_411_MOI_rep2 -0.1 -0.2 +0.5 N.D. +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A +0.0 +0.0 +0.4 N.D. -0.1
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.3 +0.1 +0.0 N.D. -0.0
phage ICP3_phage_41.1_MOI_rep1 +0.1 +0.4 +0.2 N.D. -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A +0.1 -0.1 +0.1 N.D. +0.5
lb_aerobic LB_Aerobic_18HR_ZN18A +0.4 -0.1 +0.2 N.D. +0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B +0.4 -0.2 +0.1 N.D. +0.3
phage ICP3_phage_4.1_MOI_rep2 -0.0 -0.1 +0.6 N.D. +0.3
phage ICP1_phage_2.3_MOI_rep1 -0.0 +0.1 +0.4 N.D. +0.3
lb_anaerobic LB_Anaerobic_18HR_ZN20A +0.2 -0.1 +0.2 N.D. +0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.3 +0.1 +0.4 N.D. -0.0
lb_aerobic LB_Aerobic_18HR_ZN18B +0.3 +0.0 +0.2 N.D. +0.4
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