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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05525 and CSW01_05530 are separated by 16 nucleotides
CSW01_05530 and CSW01_05535 are separated by 28 nucleotides
CSW01_05535 and CSW01_05540 are separated by 3 nucleotides
CSW01_05540 and CSW01_05545 are separated by 623 nucleotides
CSW01_05525: CSW01_05525 - transcriptional regulator, at 1,151,367 to 1,152,977
_05525
CSW01_05530: CSW01_05530 - two-component system response regulator, at 1,152,994 to 1,154,337
_05530
CSW01_05535: CSW01_05535 - histidine kinase, at 1,154,366 to 1,155,970
_05535
CSW01_05540: CSW01_05540 - phosphate ABC transporter substrate-binding protein, at 1,155,974 to 1,156,786
_05540
CSW01_05545: CSW01_05545 - peptide ABC transporter substrate-binding protein, at 1,157,410 to 1,159,041
_05545
Group
Condition
CSW01
_05525
CSW01
_05530
CSW01
_05535
CSW01
_05540
CSW01
_05545
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.0
-0.1
+0.0
-0.7
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.3
-0.5
+0.0
+0.0
-0.6
phage
ICP1_phage_2.3_MOI_rep1
-0.3
+0.2
-0.1
-0.1
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.4
-0.3
+0.1
-0.1
-0.6
phage
ICP1_phage_0.23_MOI_rep2
-0.0
+0.2
-0.3
+0.0
-0.4
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.4
-0.1
+0.0
-0.7
phage
ICP1_phage_2.3_MOI_rep2
+0.0
+0.3
-0.0
-0.2
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.2
-0.1
+0.0
+0.0
-0.5
phage
ICP3_phage_4.1_MOI_rep1
-0.0
+0.2
-0.1
-0.0
-0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.1
+0.0
+0.1
-0.4
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.0
-0.1
+0.1
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.3
+0.1
-0.1
-0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
-0.1
+0.1
+0.0
-0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.3
-0.0
+0.2
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.2
-0.1
+0.1
+0.1
-0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.1
-0.2
-0.0
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.2
-0.0
+0.1
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.2
-0.0
+0.1
+0.1
-0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.3
+0.1
+0.2
-0.5
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
-0.0
+0.1
+0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
+0.0
+0.1
+0.2
-0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.0
+0.1
-0.2
+0.2
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.2
+0.3
+0.0
+0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.0
+0.5
-0.2
+0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.0
+0.1
-0.0
+0.2
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.4
+0.0
-0.0
+0.3
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.2
+0.0
+0.1
+0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.3
+0.2
-0.1
+0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.3
-0.0
-0.0
+0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
+0.1
+0.1
+0.3
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