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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_05195 and CSW01_05200 are separated by 3 nucleotides
CSW01_05200 and CSW01_05205 overlap by 12 nucleotides
CSW01_05205 and CSW01_05210 are separated by 305 nucleotides
CSW01_05210 and CSW01_05215 are separated by 59 nucleotides
CSW01_05195: CSW01_05195 - sigma-54-dependent Fis family transcriptional regulator, at 1,088,991 to 1,090,358
_05195
CSW01_05200: CSW01_05200 - phosphorelay protein LuxU, at 1,090,362 to 1,090,703
_05200
CSW01_05205: CSW01_05205 - hypothetical protein, at 1,090,692 to 1,091,582
_05205
CSW01_05210: CSW01_05210 - GTP 3',8-cyclase MoaA, at 1,091,888 to 1,092,877
_05210
CSW01_05215: CSW01_05215 - molybdenum cofactor biosynthesis protein B, at 1,092,937 to 1,093,449
_05215
Group
Condition
CSW01
_05195
CSW01
_05200
CSW01
_05205
CSW01
_05210
CSW01
_05215
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.9
N.D.
-0.0
-0.1
+0.1
phage
ICP3_phage_411_MOI_rep2
-1.0
N.D.
+0.1
-0.4
-0.6
phage
ICP3_phage_4.1_MOI_rep2
-1.3
N.D.
-0.0
-0.4
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.8
N.D.
+0.0
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-1.0
N.D.
-0.1
-0.4
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.6
N.D.
-0.1
-0.4
-0.6
phage
ICP3_phage_41.1_MOI_rep2
-0.7
N.D.
+0.4
-0.3
-1.1
phage
ICP1_phage_2.3_MOI_rep1
-0.6
N.D.
-0.1
-0.4
-0.6
phage
ICP3_phage_0.41_MOI_rep2
-0.6
N.D.
-0.2
-0.3
-0.4
phage
NoPhageControl
-1.4
N.D.
+0.0
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-1.0
N.D.
-0.0
-0.3
+0.0
phage
ICP3_phage_411_MOI_rep1
-0.0
N.D.
+0.1
-0.3
-1.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.8
N.D.
-0.0
-0.4
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.8
N.D.
-0.1
-0.2
+0.1
phage
NoPhageControl
-0.8
N.D.
-0.1
-0.2
+0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.4
N.D.
+0.1
-0.2
-0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.9
N.D.
-0.1
-0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.3
N.D.
+0.1
-0.7
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.7
N.D.
-0.3
+0.0
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.6
N.D.
-0.1
-0.3
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.5
N.D.
-0.2
+0.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.5
N.D.
-0.0
+0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.9
N.D.
+0.1
-0.1
-0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.9
N.D.
-0.1
+0.1
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.9
N.D.
-0.1
-0.1
+0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.7
N.D.
+0.0
+0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.7
N.D.
-0.1
+0.2
+0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.5
N.D.
+0.0
-0.2
+0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.4
N.D.
+0.0
-0.2
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.5
N.D.
-0.1
-0.1
+0.4
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