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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04515 and CSW01_04520 are separated by 200 nucleotides
CSW01_04520 and CSW01_04525 are separated by 65 nucleotides
CSW01_04525 and CSW01_04530 overlap by 4 nucleotides
CSW01_04530 and CSW01_04535 are separated by 764 nucleotides
CSW01_04515: CSW01_04515 - 50S ribosomal protein L36, at 939,618 to 939,743
_04515
CSW01_04520: CSW01_04520 - aminobenzoyl-glutamate transporter, at 939,944 to 941,530
_04520
CSW01_04525: CSW01_04525 - DUF188 domain-containing protein, at 941,596 to 942,045
_04525
CSW01_04530: CSW01_04530 - hypothetical protein, at 942,042 to 942,341
_04530
CSW01_04535: CSW01_04535 - N-acetyltransferase, at 943,106 to 943,729
_04535
Group
Condition
CSW01
_04515
CSW01
_04520
CSW01
_04525
CSW01
_04530
CSW01
_04535
phage
ICP3_phage_41.1_MOI_rep2
-0.4
+0.1
-0.5
-0.5
-0.4
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.1
-0.3
-0.6
-0.4
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.1
-0.3
-0.4
-0.6
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.0
-0.6
-0.1
-0.4
phage
ICP3_phage_0.41_MOI_rep2
-0.3
+0.1
-0.0
-0.2
-0.5
phage
ICP1_phage_23.5_MOI_rep2
-0.2
+0.1
-0.1
-0.2
-0.6
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.4
+0.0
-0.2
-0.0
-0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.0
+0.2
-0.3
-0.4
-0.3
phage
ICP1_phage_2.3_MOI_rep1
+0.4
+0.1
+0.2
-0.3
-1.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
+0.0
-0.4
+0.0
-0.0
phage
ICP3_phage_0.41_MOI_rep1
+0.6
+0.1
-0.1
-0.2
-1.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
-0.1
-0.1
+0.1
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.4
+0.0
-0.2
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.5
+0.1
+0.0
-0.0
-0.1
phage
NoPhageControl
-0.0
-0.0
-0.4
+0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.0
+0.0
+0.1
+0.3
-1.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
+0.0
-0.2
+0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
+0.0
-0.0
+0.2
-0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.3
+0.1
-0.0
+0.1
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.1
-0.2
+0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.3
+0.2
-0.1
+0.0
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
+0.0
-0.2
+0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.4
+0.3
-0.1
+0.4
-0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.3
+0.1
-0.0
-0.3
-0.1
phage
ICP3_phage_411_MOI_rep2
+0.3
+0.0
+0.5
-0.5
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
+0.1
+0.1
+0.1
-0.1
phage
ICP3_phage_411_MOI_rep1
+0.1
+0.0
+0.3
-0.3
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
+0.1
-0.1
+0.2
+0.3
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.1
+0.3
+0.1
-0.5
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.0
+0.1
-0.1
+0.2
+0.2
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