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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04500 and CSW01_04505 are separated by 225 nucleotides
CSW01_04505 and CSW01_04510 are separated by 134 nucleotides
CSW01_04510 and CSW01_04515 overlap by 4 nucleotides
CSW01_04515 and CSW01_04520 are separated by 200 nucleotides
CSW01_04500: CSW01_04500 - proline--tRNA ligase, at 936,593 to 938,308
_04500
CSW01_04505: CSW01_04505 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 938,534 to 939,229
_04505
CSW01_04510: CSW01_04510 - 50S ribosomal protein L31 type B, at 939,364 to 939,621
_04510
CSW01_04515: CSW01_04515 - 50S ribosomal protein L36, at 939,618 to 939,743
_04515
CSW01_04520: CSW01_04520 - aminobenzoyl-glutamate transporter, at 939,944 to 941,530
_04520
Group
Condition
CSW01
_04500
CSW01
_04505
CSW01
_04510
CSW01
_04515
CSW01
_04520
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
N.D.
-0.2
+0.0
-0.4
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
N.D.
-0.1
-0.3
-0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
-0.1
-0.2
-0.1
+0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
N.D.
-0.0
+0.1
-0.4
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
+0.2
-0.1
-0.5
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
-0.1
+0.3
-0.3
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
+0.2
-0.3
-0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
+0.1
+0.1
-0.3
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
+0.2
-0.1
-0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
+0.2
-0.1
-0.2
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
-0.2
+0.2
-0.1
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
+0.1
+0.2
-0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
+0.3
+0.1
-0.3
+0.0
phage
ICP3_phage_41.1_MOI_rep1
N.D.
-0.1
+0.3
-0.4
+0.3
phage
ICP3_phage_4.1_MOI_rep2
N.D.
-0.4
+0.2
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
N.D.
+0.1
+0.3
-0.3
+0.0
phage
ICP1_phage_23.5_MOI_rep2
N.D.
-0.1
+0.3
-0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
+0.2
+0.2
-0.2
+0.0
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+0.1
+0.6
-0.3
+0.1
phage
ICP3_phage_41.1_MOI_rep2
N.D.
-0.0
+0.8
-0.4
+0.1
phage
ICP1_phage_2.3_MOI_rep1
N.D.
+0.2
-0.1
+0.4
+0.1
phage
ICP3_phage_411_MOI_rep2
N.D.
+0.3
-0.1
+0.3
+0.0
phage
ICP3_phage_4.1_MOI_rep1
N.D.
+0.0
+0.6
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep1
N.D.
+0.1
+0.3
+0.0
+0.2
phage
ICP1_phage_23.5_MOI_rep1
N.D.
+0.1
+0.1
+0.3
+0.1
phage
ICP1_phage_235.3_MOI_rep2
N.D.
-0.1
+0.7
+0.0
+0.0
phage
ICP1_phage_235.3_MOI_rep1
N.D.
+0.1
+0.5
+0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep2
N.D.
+0.3
+0.4
+0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep2
N.D.
-0.2
+0.9
+0.3
+0.2
phage
ICP3_phage_0.41_MOI_rep1
N.D.
+0.6
+0.5
+0.6
+0.1
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