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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04315 and CSW01_04320 overlap by 1 nucleotides
CSW01_04320 and CSW01_04325 are separated by 6 nucleotides
CSW01_04325 and CSW01_04330 are separated by 5 nucleotides
CSW01_04330 and CSW01_04335 are separated by 15 nucleotides
CSW01_04315: CSW01_04315 - TCP pilus virulence regulatory protein, at 898,635 to 899,465
_04315
CSW01_04320: CSW01_04320 - type 4 prepilin-like proteins leader peptide-processing enzyme, at 899,465 to 900,226
_04320
CSW01_04325: CSW01_04325 - methyl-accepting chemotaxis protein, at 900,233 to 902,113
_04325
CSW01_04330: CSW01_04330 - accessory colonization factor AcfC, at 902,119 to 902,889
_04330
CSW01_04335: CSW01_04335 - RDD family protein, at 902,905 to 903,378
_04335
Group
Condition
CSW01
_04315
CSW01
_04320
CSW01
_04325
CSW01
_04330
CSW01
_04335
phage
ICP3_phage_41.1_MOI_rep1
-0.6
-1.0
-0.1
-0.2
-0.9
phage
ICP3_phage_0.41_MOI_rep1
-0.6
-0.7
-0.1
-0.1
-0.4
phage
ICP3_phage_411_MOI_rep2
-0.8
-0.8
-0.3
-0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.3
-0.8
-0.1
-0.2
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.6
-0.5
-0.3
-0.2
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.5
-0.4
-0.2
-0.1
-0.5
phage
ICP3_phage_41.1_MOI_rep2
-0.9
-0.4
-0.2
-0.0
-0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.7
-0.4
-0.3
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.4
-0.5
-0.2
-0.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.5
-0.4
-0.2
-0.1
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.5
-0.3
-0.2
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.6
-0.3
-0.2
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.6
-0.3
-0.2
-0.2
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.5
-0.7
-0.1
-0.2
+0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.7
-0.3
-0.1
-0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.3
-0.5
-0.3
-0.1
-0.3
phage
ICP3_phage_4.1_MOI_rep1
-0.5
-0.6
-0.3
+0.1
-0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.5
-0.5
-0.1
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
-0.3
-0.2
-0.1
-0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.5
-0.4
-0.1
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.3
-0.4
-0.1
-0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.5
-0.2
-0.1
+0.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.5
-0.5
-0.0
-0.0
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.3
-0.5
-0.1
-0.1
-0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.4
-0.4
-0.1
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.5
-0.3
-0.1
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.4
-0.3
-0.1
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.2
-0.3
-0.0
-0.1
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.5
-0.3
+0.0
-0.0
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.4
-0.3
-0.1
-0.1
-0.2
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