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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04290 and CSW01_04295 are separated by 15 nucleotides
CSW01_04295 and CSW01_04300 overlap by 11 nucleotides
CSW01_04300 and CSW01_04305 overlap by 26 nucleotides
CSW01_04305 and CSW01_04310 are separated by 9 nucleotides
CSW01_04290: CSW01_04290 - toxin coregulated pilus biosynthesis protein D, at 893,594 to 894,430
_04290
CSW01_04295: CSW01_04295 - toxin coregulated pilus biosynthesis protein S, at 894,446 to 894,904
_04295
CSW01_04300: CSW01_04300 - toxin coregulated pilus biosynthesis protein T, at 894,894 to 896,405
_04300
CSW01_04305: CSW01_04305 - toxin coregulated pilus biosynthesis protein E, at 896,380 to 897,402
_04305
CSW01_04310: CSW01_04310 - pilus assembly protein, at 897,412 to 898,428
_04310
Group
Condition
CSW01
_04290
CSW01
_04295
CSW01
_04300
CSW01
_04305
CSW01
_04310
phage
ICP3_phage_0.41_MOI_rep2
-0.6
-0.5
-0.1
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.4
-0.4
-0.2
-0.2
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.5
-0.1
-0.3
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.4
-0.1
-0.2
-0.2
-0.3
phage
ICP1_phage_235.3_MOI_rep1
-0.5
-0.3
+0.2
-0.3
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.7
-0.1
-0.1
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.3
-0.4
-0.2
-0.2
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.3
-0.7
+0.0
+0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.4
-0.1
-0.1
-0.1
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.3
-0.2
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
-0.3
-0.1
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
-0.3
-0.1
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.3
-0.2
-0.2
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.0
-0.7
-0.0
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.3
-0.1
-0.1
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.2
-0.2
-0.1
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.1
-0.2
-0.3
phage
ICP1_phage_2.3_MOI_rep1
-0.4
-0.1
+0.1
-0.1
-0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.2
-0.1
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.3
-0.1
-0.1
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
-0.1
-0.1
-0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.3
-0.1
+0.2
-0.0
-0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
-0.1
-0.1
-0.0
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.1
-0.1
-0.1
-0.1
phage
NoPhageControl
-0.1
-0.3
-0.1
-0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.4
+0.0
+0.1
+0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+0.4
-0.0
-0.2
-0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.3
+0.2
-0.0
-0.0
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.1
+0.1
-0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.2
-0.2
+0.1
+0.1
+0.1
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