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Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04265 and CSW01_04270 are separated by 79 nucleotides
CSW01_04270 and CSW01_04275 overlap by 1 nucleotides
CSW01_04275 and CSW01_04280 are separated by 2 nucleotides
CSW01_04280 and CSW01_04285 overlap by 8 nucleotides
CSW01_04265: CSW01_04265 - toxin coregulated pilin, at 889,188 to 889,862
_04265
CSW01_04270: CSW01_04270 - toxin coregulated pilus biosynthesis protein B, at 889,942 to 891,234
_04270
CSW01_04275: CSW01_04275 - toxin coregulated pilus biosynthesis protein Q, at 891,234 to 891,686
_04275
CSW01_04280: CSW01_04280 - toxin coregulated pilus biosynthesis outer membrane protein C, at 891,689 to 893,158
_04280
CSW01_04285: CSW01_04285 - toxin coregulated pilus biosynthesis protein R, at 893,151 to 893,606
_04285
Group
Condition
CSW01
_04265
CSW01
_04270
CSW01
_04275
CSW01
_04280
CSW01
_04285
phage
ICP3_phage_4.1_MOI_rep2
+0.2
-0.0
-0.1
-0.1
-3.6
phage
ICP3_phage_41.1_MOI_rep1
+0.0
-0.2
-0.5
-0.2
-1.7
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.1
-0.2
-0.2
-1.7
phage
ICP3_phage_0.41_MOI_rep1
+0.0
-0.0
-0.5
-0.0
-1.2
phage
ICP3_phage_411_MOI_rep2
-0.1
-0.1
-0.3
-0.1
-1.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.2
-0.1
-0.2
-0.2
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.2
-0.2
-0.2
-0.5
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.1
-0.2
-0.2
-0.8
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.0
-0.2
-0.2
-1.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.2
-0.2
-0.2
-0.3
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.2
-0.3
-0.2
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-0.2
-0.1
-0.2
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
-0.0
-0.2
-0.0
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.2
-0.2
-0.1
-0.2
-0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.1
-0.1
-0.1
-0.4
phage
ICP1_phage_2.3_MOI_rep1
+0.1
-0.1
+0.2
-0.1
-1.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.3
-0.2
-0.3
-0.2
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
-0.1
-0.1
-0.1
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
-0.1
-0.2
-0.1
-0.3
phage
ICP1_phage_235.3_MOI_rep1
-0.2
-0.3
+0.1
-0.2
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.1
-0.1
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
-0.1
-0.2
-0.2
-0.2
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.1
-0.0
-0.2
-0.6
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.0
-0.2
+0.0
-0.1
-0.4
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.1
+0.1
+0.0
-0.7
phage
ICP1_phage_23.5_MOI_rep1
+0.0
-0.2
-0.3
-0.2
-0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.1
-0.2
-0.2
-0.3
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
-0.1
-0.1
-0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
-0.1
-0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
-0.1
-0.0
-0.0
+0.4
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