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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04240 and CSW01_04245 are separated by 109 nucleotides
CSW01_04245 and CSW01_04250 are separated by 275 nucleotides
CSW01_04250 and CSW01_04255 are separated by 440 nucleotides
CSW01_04255 and CSW01_04260 overlap by 16 nucleotides
CSW01_04240: CSW01_04240 - peptidase, at 883,464 to 884,402
_04240
CSW01_04245: CSW01_04245 - 2-Cys peroxiredoxin, at 884,512 to 885,006
_04245
CSW01_04250: CSW01_04250 - toxin coregulated pilus biosynthesis protein I, at 885,282 to 887,144
_04250
CSW01_04255: CSW01_04255 - toxin coregulated pilus biosynthesis protein P, at 887,585 to 888,250
_04255
CSW01_04260: CSW01_04260 - pilus assembly protein, at 888,235 to 888,645
_04260
Group
Condition
CSW01
_04240
CSW01
_04245
CSW01
_04250
CSW01
_04255
CSW01
_04260
phage
ICP3_phage_0.41_MOI_rep2
-0.1
-0.1
-0.1
+0.0
-1.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
-0.3
-0.2
-0.1
-0.4
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
-0.3
-0.1
-0.1
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.3
-0.2
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.1
-0.1
-0.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.2
-0.2
+0.0
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
-0.2
-0.2
-0.2
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.1
-0.2
-0.2
-0.1
-0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.2
-0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep1
-0.1
-0.1
-0.2
-0.0
-0.4
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.2
-0.0
+0.2
-0.9
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.0
-0.2
-0.1
+0.0
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.0
-0.1
-0.1
-0.1
-0.4
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.0
-0.1
-0.3
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.2
-0.0
-0.1
-0.6
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
-0.2
-0.1
-0.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.3
-0.2
-0.1
-0.0
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.0
+0.0
+0.1
-0.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.2
-0.1
-0.1
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
-0.0
-0.1
+0.0
-0.6
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.1
-0.1
+0.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.0
-0.2
-0.0
+0.1
-0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.2
-0.1
+0.2
-0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.0
-0.2
-0.1
-0.1
+0.2
phage
ICP1_phage_0.23_MOI_rep2
-0.2
+0.1
-0.0
-0.2
+0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.1
-0.3
-0.0
-0.1
+0.4
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.2
+0.0
-0.2
-0.3
phage
NoPhageControl
-0.0
-0.1
-0.0
-0.1
+0.4
phage
ICP1_phage_2.3_MOI_rep1
-0.0
+0.1
-0.1
-0.2
+0.5
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.0
+0.0
+0.3
+0.4
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