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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04100 and CSW01_04105 are separated by 18 nucleotides
CSW01_04105 and CSW01_04110 overlap by 53 nucleotides
CSW01_04110 and CSW01_04115 are separated by 261 nucleotides
CSW01_04115 and CSW01_04120 are separated by 51 nucleotides
CSW01_04100: CSW01_04100 - oxaloacetate decarboxylase subunit alpha, at 848,109 to 849,908
_04100
CSW01_04105: CSW01_04105 - sodium pump decarboxylase, at 849,927 to 850,346
_04105
CSW01_04110: CSW01_04110 - citrate:sodium symporter, at 850,294 to 851,640
_04110
CSW01_04115: CSW01_04115 - [citrate (pro-3S)-lyase] ligase, at 851,902 to 852,972
_04115
CSW01_04120: CSW01_04120 - citrate lyase ACP, at 853,024 to 853,320
_04120
Group
Condition
CSW01
_04100
CSW01
_04105
CSW01
_04110
CSW01
_04115
CSW01
_04120
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
-0.8
-0.1
-0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.0
-0.5
-0.0
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.0
-0.5
-0.0
-0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep2
+0.0
+0.3
-0.2
-0.0
-0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.3
+0.0
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.0
-0.4
-0.0
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
-0.4
+0.0
-0.0
-0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.0
+0.1
-0.2
-0.1
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.4
-0.2
+0.1
-0.6
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
-0.4
-0.1
+0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
-0.5
+0.0
-0.0
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.2
-0.1
-0.0
-0.2
phage
ICP3_phage_411_MOI_rep2
+0.0
+0.2
-0.2
-0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.2
-0.1
-0.1
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.0
+0.2
-0.2
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.2
+0.0
-0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.4
+0.0
+0.0
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
-0.3
-0.0
-0.0
+0.1
phage
NoPhageControl
-0.0
+0.2
-0.0
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.2
-0.0
+0.0
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.1
-0.2
+0.0
+0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.1
+0.0
+0.1
-0.0
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.1
-0.1
+0.1
+0.0
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.0
+0.1
+0.0
+0.2
phage
ICP1_phage_0.23_MOI_rep2
+0.0
+0.0
-0.0
-0.0
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
-0.1
+0.1
-0.0
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.0
+0.1
-0.0
+0.3
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.3
+0.1
-0.0
-0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.6
-0.0
-0.0
-0.3
phage
ICP1_phage_23.5_MOI_rep1
+0.0
+0.2
+0.2
-0.0
+0.4
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