Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 45 experiments or choose conditions or try the comparative fitness browser

500 ntCSW01_04040 and CSW01_04045 overlap by 70 nucleotidesCSW01_04045 and CSW01_04050 are separated by 9 nucleotidesCSW01_04050 and CSW01_04055 are separated by 217 nucleotidesCSW01_04055 and CSW01_04060 are separated by 79 nucleotides CSW01_04040: CSW01_04040 - ABC transporter ATP-binding protein, at 834,415 to 835,254 _04040 CSW01_04045: CSW01_04045 - vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD, at 835,185 to 835,970 _04045 CSW01_04050: CSW01_04050 - LysR family transcriptional regulator, at 835,980 to 836,906 _04050 CSW01_04055: CSW01_04055 - alkyl/aryl-sulfatase, at 837,124 to 839,106 _04055 CSW01_04060: CSW01_04060 - alanine:cation symporter family protein, at 839,186 to 840,736 _04060
Group Condition CSW01_04040 CSW01_04045 CSW01_04050 CSW01_04055 CSW01_04060
phage ICP3_phage_411_MOI_rep1 +0.0 +0.4 -0.2 -0.2 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A +0.1 +0.1 -0.1 -0.1 -0.1
phage ICP1_phage_0.23_MOI_rep2 -0.4 +0.4 +0.2 -0.1 -0.1
lb_aerobic LB_Aerobic_60MIN_ZN2B +0.2 -0.0 -0.2 -0.0 +0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.1 +0.1 +0.1 -0.1 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.1 +0.1 +0.1 -0.1 -0.1
lb_anaerobic LB_Anaerobic_18HR_ZN20A +0.2 +0.1 +0.0 -0.1 -0.1
phage ICP1_phage_23.5_MOI_rep1 -0.2 +0.4 +0.3 -0.2 -0.1
phage ICP1_phage_23.5_MOI_rep2 -0.5 +0.6 +0.5 -0.0 -0.3
phage ICP3_phage_0.41_MOI_rep2 -0.3 +0.5 -0.0 -0.1 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.1 +0.0 +0.2 -0.1 +0.1
phage ICP1_phage_2.3_MOI_rep1 +0.2 +0.5 -0.2 +0.0 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.2 +0.1 +0.1 -0.0 -0.0
lb_aerobic LB_Aerobic_18HR_ZN18A +0.2 +0.1 +0.0 +0.0 +0.1
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.2 +0.0 +0.1 +0.0 +0.0
lb_aerobic LB_Aerobic_18HR_ZN18B +0.2 +0.1 +0.1 -0.0 +0.0
phage ICP1_phage_2.3_MOI_rep2 -0.4 +0.6 +0.2 -0.1 +0.1
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 +0.2 +0.0 +0.0 +0.1
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.2 +0.0 +0.2 +0.0 +0.1
phage ICP1_phage_235.3_MOI_rep2 -0.2 +0.4 +0.1 +0.1 +0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.3 +0.0 +0.1 +0.1 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.1 +0.1 +0.2 +0.0 +0.1
phage ICP3_phage_4.1_MOI_rep1 -0.3 +0.4 +0.2 -0.1 +0.2
phage ICP3_phage_41.1_MOI_rep1 -0.4 +0.6 +0.3 +0.2 -0.1
phage ICP1_phage_0.23_MOI_rep1 -0.3 +0.5 +0.1 -0.1 +0.3
phage ICP3_phage_41.1_MOI_rep2 -0.2 +0.6 +0.2 -0.1 +0.0
phage ICP3_phage_4.1_MOI_rep2 +0.0 +0.4 +0.2 +0.2 -0.1
phage ICP1_phage_235.3_MOI_rep1 -0.2 +0.6 +0.3 -0.1 +0.1
phage ICP3_phage_411_MOI_rep2 -0.0 +0.3 +0.3 +0.2 -0.0
phage ICP3_phage_0.41_MOI_rep1 -0.2 +0.6 +0.3 +0.1 +0.1
remove
CSW01_04040
plot		 remove
CSW01_04045
plot		 remove
CSW01_04050		 remove
CSW01_04055
plot		 remove
CSW01_04060
plot