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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_04020 and CSW01_04025 are separated by 177 nucleotides
CSW01_04025 and CSW01_04030 overlap by 4 nucleotides
CSW01_04030 and CSW01_04035 overlap by 22 nucleotides
CSW01_04035 and CSW01_04040 are separated by 116 nucleotides
CSW01_04020: CSW01_04020 - vibriobactin biosynthesis amide synthase VibH, at 829,723 to 831,039
_04020
CSW01_04025: CSW01_04025 - Fe2+-enterobactin ABC transporter substrate-binding protein, at 831,217 to 832,194
_04025
CSW01_04030: CSW01_04030 - iron ABC transporter permease, at 832,191 to 833,243
_04030
CSW01_04035: CSW01_04035 - Fe(3+)-siderophore ABC transporter permease, at 833,222 to 834,298
_04035
CSW01_04040: CSW01_04040 - ABC transporter ATP-binding protein, at 834,415 to 835,254
_04040
Group
Condition
CSW01
_04020
CSW01
_04025
CSW01
_04030
CSW01
_04035
CSW01
_04040
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.6
+0.2
-0.1
-0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.5
-0.4
-0.1
-0.1
-0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.2
-0.1
-0.2
-0.4
phage
ICP1_phage_23.5_MOI_rep2
+0.5
+0.1
+0.0
-0.2
-0.5
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.3
+0.0
-0.1
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.7
-0.4
-0.1
-0.5
+0.2
phage
NoPhageControl
+0.2
+0.0
-0.2
+0.1
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.6
+0.1
-0.1
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.2
+0.1
+0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.8
+0.2
-0.1
-0.4
-0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.0
+0.0
-0.1
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.4
+0.2
+0.1
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.3
+0.1
-0.0
+0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
+0.1
+0.2
+0.0
+0.2
phage
ICP1_phage_0.23_MOI_rep2
+0.7
+0.1
-0.0
-0.1
-0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.3
+0.0
+0.0
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
+0.1
+0.1
+0.0
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.5
+0.1
+0.1
-0.1
-0.2
phage
ICP3_phage_0.41_MOI_rep1
+0.6
-0.1
+0.0
-0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.0
+0.2
+0.0
+0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.4
-0.0
+0.3
+0.0
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
+0.2
+0.1
+0.0
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
-0.0
+0.2
-0.0
+0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.5
+0.3
+0.1
-0.1
-0.4
phage
ICP3_phage_411_MOI_rep1
+0.6
-0.1
+0.1
-0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.2
+0.0
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
+0.2
-0.0
+0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
+0.2
+0.3
-0.0
+0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.6
-0.1
+0.1
+0.0
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.0
+0.2
+0.1
+0.1
+0.2
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