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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03840 and CSW01_03845 overlap by 46 nucleotides
CSW01_03845 and CSW01_03850 are separated by 10 nucleotides
CSW01_03850 and CSW01_03855 are separated by 104 nucleotides
CSW01_03855 and CSW01_03860 are separated by 21 nucleotides
CSW01_03840: CSW01_03840 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 791,700 to 792,758
_03840
CSW01_03845: CSW01_03845 - hypothetical protein, at 792,713 to 792,976
_03845
CSW01_03850: CSW01_03850 - tRNA guanosine(34) transglycosylase Tgt, at 792,987 to 794,126
_03850
CSW01_03855: CSW01_03855 - preprotein translocase subunit YajC, at 794,231 to 794,563
_03855
CSW01_03860: CSW01_03860 - protein translocase subunit SecD, at 794,585 to 796,438
_03860
Group
Condition
CSW01
_03840
CSW01
_03845
CSW01
_03850
CSW01
_03855
CSW01
_03860
phage
ICP1_phage_23.5_MOI_rep2
-0.5
-0.5
-0.6
-1.0
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.3
-1.8
+0.3
-0.0
-0.3
phage
ICP1_phage_235.3_MOI_rep1
-0.3
-0.8
-0.2
-0.6
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.7
-0.3
-0.6
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.9
-0.1
-0.5
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.1
-0.8
+0.1
-0.9
-0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.0
-0.9
-0.4
-0.6
+0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
-0.6
-0.2
-0.5
-0.1
phage
NoPhageControl
-0.3
-0.4
-0.4
-0.2
-0.1
phage
NoPhageControl
-0.1
-0.4
-0.5
-0.1
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.4
-0.6
-0.3
-0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.2
-0.3
-0.1
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
+0.2
-0.3
-0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.6
-0.2
-0.7
-0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.4
-0.1
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.4
-0.2
-0.4
-0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.4
+0.6
-0.5
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
+0.8
-0.4
-0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.2
-0.2
-0.1
+0.3
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.0
+0.6
-0.3
-0.2
-0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
+0.9
-0.3
-0.4
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
+0.4
-0.2
-0.0
+0.2
phage
ICP3_phage_411_MOI_rep2
-0.0
+0.6
-0.0
-0.4
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.3
-0.3
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
+0.5
-0.4
+0.0
+0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.2
+1.0
+0.0
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
+0.6
-0.0
-0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.0
+0.9
-0.3
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
+0.5
-0.1
+0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.6
-0.2
+0.3
-0.1
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