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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03540 and CSW01_03545 are separated by 92 nucleotides
CSW01_03545 and CSW01_03550 are separated by 394 nucleotides
CSW01_03550 and CSW01_03555 are separated by 198 nucleotides
CSW01_03555 and CSW01_03560 are separated by 68 nucleotides
CSW01_03540: CSW01_03540 - thymidylate synthase, at 720,312 to 721,163
_03540
CSW01_03545: CSW01_03545 - Na/Pi cotransporter family protein, at 721,256 to 722,404
_03545
CSW01_03550: CSW01_03550 - transcriptional activator protein NhaR, at 722,799 to 723,689
_03550
CSW01_03555: CSW01_03555 - transcriptional regulator, at 723,888 to 724,214
_03555
CSW01_03560: CSW01_03560 - 30S ribosomal protein S20, at 724,283 to 724,543
_03560
Group
Condition
CSW01
_03540
CSW01
_03545
CSW01
_03550
CSW01
_03555
CSW01
_03560
phage
ICP1_phage_2.3_MOI_rep2
N.D.
-0.3
-0.1
-0.5
N.D.
phage
ICP1_phage_235.3_MOI_rep2
N.D.
-0.1
-0.2
-0.5
N.D.
phage
ICP1_phage_235.3_MOI_rep1
N.D.
+0.0
-0.0
-0.6
N.D.
phage
ICP3_phage_411_MOI_rep1
N.D.
-0.0
+0.0
-0.6
N.D.
phage
ICP1_phage_23.5_MOI_rep1
N.D.
-0.5
+0.1
-0.0
N.D.
phage
ICP1_phage_23.5_MOI_rep2
N.D.
-0.3
+0.0
-0.1
N.D.
phage
ICP3_phage_411_MOI_rep2
N.D.
-0.2
+0.2
-0.3
N.D.
phage
ICP1_phage_2.3_MOI_rep1
N.D.
+0.1
-0.1
-0.2
N.D.
phage
NoPhageControl
N.D.
+0.1
+0.1
-0.3
N.D.
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+0.1
+0.1
-0.2
N.D.
phage
ICP3_phage_4.1_MOI_rep2
N.D.
+0.1
+0.1
-0.2
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
+0.1
+0.2
-0.2
N.D.
phage
ICP3_phage_0.41_MOI_rep1
N.D.
+0.2
+0.1
-0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
+0.3
-0.1
-0.0
N.D.
phage
ICP1_phage_0.23_MOI_rep2
N.D.
-0.1
+0.3
+0.1
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
+0.3
+0.1
-0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
+0.3
+0.0
+0.1
N.D.
phage
ICP3_phage_41.1_MOI_rep2
N.D.
+0.5
+0.2
-0.3
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
N.D.
+0.2
+0.1
+0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
+0.3
+0.2
-0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
+0.2
+0.2
-0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
+0.4
+0.1
-0.0
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
N.D.
+0.2
+0.1
+0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
+0.2
+0.2
+0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
+0.2
+0.2
+0.1
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
+0.2
+0.3
+0.1
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
+0.3
+0.1
+0.2
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
+0.2
+0.1
+0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
N.D.
+0.2
+0.1
+0.3
N.D.
phage
ICP3_phage_41.1_MOI_rep1
N.D.
+0.3
+0.1
+0.4
N.D.
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