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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03410 and CSW01_03415 are separated by 115 nucleotides
CSW01_03415 and CSW01_03420 are separated by 86 nucleotides
CSW01_03420 and CSW01_03425 are separated by 46 nucleotides
CSW01_03425 and CSW01_03430 are separated by 52 nucleotides
CSW01_03410: CSW01_03410 - polyribonucleotide nucleotidyltransferase, at 688,989 to 691,118
_03410
CSW01_03415: CSW01_03415 - lipoprotein NlpI, at 691,234 to 692,145
_03415
CSW01_03420: CSW01_03420 - MarR family transcriptional regulator, at 692,232 to 692,651
_03420
CSW01_03425: CSW01_03425 - MATE family efflux transporter, at 692,698 to 694,035
_03425
CSW01_03430: CSW01_03430 - U32 family peptidase, at 694,088 to 694,966
_03430
Group
Condition
CSW01
_03410
CSW01
_03415
CSW01
_03420
CSW01
_03425
CSW01
_03430
phage
ICP1_phage_23.5_MOI_rep1
-3.8
+0.2
-1.3
+0.3
+0.1
phage
ICP3_phage_0.41_MOI_rep2
-3.9
+0.3
-0.1
+0.3
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-3.5
+0.1
-0.2
+0.2
+0.0
phage
ICP3_phage_41.1_MOI_rep1
-2.9
+0.3
-0.8
+0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-3.4
-0.0
-0.0
+0.3
+0.1
phage
ICP3_phage_4.1_MOI_rep2
-3.1
-0.2
+0.0
+0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
-2.8
+0.2
-0.6
+0.2
+0.0
phage
ICP1_phage_235.3_MOI_rep2
-2.7
-0.2
-0.2
+0.1
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-3.1
-0.0
+0.2
+0.1
+0.0
phage
ICP1_phage_23.5_MOI_rep2
-2.6
+0.2
-0.1
+0.2
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-1.7
-1.1
+0.2
+0.2
+0.0
phage
ICP1_phage_0.23_MOI_rep2
-2.9
+0.4
-0.1
+0.0
+0.4
phage
ICP3_phage_41.1_MOI_rep2
-2.5
+0.3
-0.4
+0.2
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-2.1
-0.1
-0.2
+0.1
+0.1
phage
NoPhageControl
-2.4
+0.0
+0.2
+0.0
+0.0
phage
ICP1_phage_2.3_MOI_rep1
-2.2
-0.1
-0.0
+0.2
+0.0
phage
ICP3_phage_411_MOI_rep1
-1.8
-0.1
-0.4
+0.3
-0.1
phage
ICP3_phage_411_MOI_rep2
-2.4
+0.3
+0.0
+0.1
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-1.5
-0.2
-0.3
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-1.3
-0.5
-0.1
-0.0
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-1.3
-0.4
-0.0
-0.0
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-1.3
-0.4
-0.0
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-1.1
-0.0
-0.3
-0.0
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-1.4
-0.1
-0.1
+0.0
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-1.6
-0.1
-0.2
+0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.2
-0.1
-0.3
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.4
+0.0
-0.1
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-1.2
-0.2
+0.1
+0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-1.2
-0.0
+0.0
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.8
-0.4
+0.4
+0.1
-0.1
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