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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03290 and CSW01_03295 are separated by 283 nucleotides
CSW01_03295 and CSW01_03300 are separated by 97 nucleotides
CSW01_03300 and CSW01_03305 are separated by 10 nucleotides
CSW01_03305 and CSW01_03310 are separated by 81 nucleotides
CSW01_03290: CSW01_03290 - glutamate-1-semialdehyde 2,1-aminomutase, at 663,009 to 664,307
_03290
CSW01_03295: CSW01_03295 - iron-sulfur cluster insertion protein ErpA, at 664,591 to 664,932
_03295
CSW01_03300: CSW01_03300 - efflux RND transporter periplasmic adaptor subunit, at 665,030 to 666,130
_03300
CSW01_03305: CSW01_03305 - AcrB/AcrD/AcrF family protein, at 666,141 to 669,260
_03305
CSW01_03310: CSW01_03310 - peptidase M23, at 669,342 to 670,643
_03310
Group
Condition
CSW01
_03290
CSW01
_03295
CSW01
_03300
CSW01
_03305
CSW01
_03310
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
-0.4
+0.1
+0.0
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
-0.2
-0.2
+0.1
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
-0.1
-0.0
-0.0
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
-0.5
+0.0
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
N.D.
-0.1
+0.0
+0.0
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
-0.1
+0.1
+0.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
-0.1
-0.1
+0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
N.D.
+0.1
-0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
N.D.
-0.0
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
N.D.
N.D.
+0.1
-0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
+0.1
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
N.D.
-0.1
+0.0
+0.1
phage
ICP1_phage_2.3_MOI_rep1
N.D.
N.D.
+0.2
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
N.D.
-0.0
+0.0
+0.1
phage
ICP1_phage_23.5_MOI_rep2
N.D.
N.D.
-0.1
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
N.D.
+0.2
-0.0
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
N.D.
+0.1
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
N.D.
N.D.
+0.2
-0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
-0.1
+0.0
+0.3
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
+0.1
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
N.D.
N.D.
+0.2
-0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep1
N.D.
N.D.
+0.2
+0.0
-0.0
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
+0.1
+0.0
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
N.D.
+0.1
+0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
N.D.
+0.1
-0.0
+0.2
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
+0.0
-0.0
+0.3
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
+0.2
+0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
+0.0
+0.0
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
N.D.
+0.1
+0.1
+0.2
phage
ICP3_phage_411_MOI_rep1
N.D.
N.D.
+0.3
-0.0
+0.2
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