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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03255 and CSW01_03260 are separated by 2 nucleotides
CSW01_03260 and CSW01_03265 are separated by 169 nucleotides
CSW01_03265 and CSW01_03270 are separated by 572 nucleotides
CSW01_03270 and CSW01_03275 overlap by 52 nucleotides
CSW01_03255: CSW01_03255 - ABC transporter permease, at 652,213 to 653,238
_03255
CSW01_03260: CSW01_03260 - ABC transporter permease, at 653,241 to 654,227
_03260
CSW01_03265: CSW01_03265 - peptide ABC transporter substrate-binding protein, at 654,397 to 656,067
_03265
CSW01_03270: CSW01_03270 - hypothetical protein, at 656,640 to 657,029
_03270
CSW01_03275: CSW01_03275 - hybrid sensor histidine kinase/response regulator, at 656,978 to 660,367
_03275
Group
Condition
CSW01
_03255
CSW01
_03260
CSW01
_03265
CSW01
_03270
CSW01
_03275
phage
ICP1_phage_235.3_MOI_rep1
+0.1
+0.1
-0.0
-1.0
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.1
-0.2
-0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep2
+0.0
+0.2
-0.0
-0.5
-0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.0
+0.1
+0.1
-0.4
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.1
-0.2
+0.1
+0.0
phage
ICP3_phage_411_MOI_rep1
+0.1
+0.0
-0.4
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-0.1
-0.1
+0.2
-0.0
phage
ICP1_phage_0.23_MOI_rep2
+0.1
-0.0
-0.3
-0.0
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-0.1
-0.1
-0.1
+0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.1
-0.1
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.0
-0.1
+0.3
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.0
+0.0
-0.2
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
-0.1
-0.1
+0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.2
+0.0
+0.0
+0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.0
-0.1
+0.0
+0.3
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.1
-0.1
+0.4
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.0
-0.1
-0.0
+0.4
+0.0
phage
ICP3_phage_0.41_MOI_rep2
+0.4
-0.0
-0.0
-0.1
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
-0.0
-0.1
+0.4
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
-0.1
+0.0
+0.5
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
-0.1
+0.0
+0.4
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.3
+0.2
-0.1
+0.2
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.1
-0.0
-0.0
+0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.1
-0.0
+0.3
+0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.1
+0.1
+0.3
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.3
+0.2
-0.2
+0.3
+0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.3
+0.1
-0.1
+0.5
-0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
-0.1
+0.1
+0.5
+0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.2
+0.0
+0.2
+0.6
-0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.4
+0.1
-0.1
+0.3
+0.2
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