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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_03020 and CSW01_03025 are separated by 128 nucleotides
CSW01_03025 and CSW01_03030 are separated by 153 nucleotides
CSW01_03030 and CSW01_03035 are separated by 223 nucleotides
CSW01_03035 and CSW01_03040 are separated by 15 nucleotides
CSW01_03020: CSW01_03020 - serine endoprotease DegQ, at 598,379 to 599,749
_03020
CSW01_03025: CSW01_03025 - hypothetical protein, at 599,878 to 600,315
_03025
CSW01_03030: CSW01_03030 - cell division protein ZapE, at 600,469 to 601,572
_03030
CSW01_03035: CSW01_03035 - 50S ribosomal protein L13, at 601,796 to 602,224
_03035
CSW01_03040: CSW01_03040 - 30S ribosomal protein S9, at 602,240 to 602,632
_03040
Group
Condition
CSW01
_03020
CSW01
_03025
CSW01
_03030
CSW01
_03035
CSW01
_03040
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.5
-1.1
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.5
-0.8
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
-0.1
-0.3
-0.9
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.0
-0.6
-0.6
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.2
-0.4
-0.6
N.D.
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-1.0
-0.0
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep2
+0.0
-0.1
-0.9
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.3
-0.5
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep2
+0.0
-0.5
-0.4
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
-0.4
-0.3
N.D.
N.D.
phage
NoPhageControl
-0.0
-0.4
-0.2
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.1
-0.3
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.0
-0.5
-0.0
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.1
-0.0
-0.4
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.5
+0.0
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
-0.4
+0.0
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.5
-0.0
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.5
-0.0
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.4
-0.5
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
-0.3
-0.2
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.3
-0.1
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep1
+0.0
+0.6
-0.9
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.3
+0.7
-0.6
N.D.
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
-0.2
-0.2
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
-0.1
-0.2
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.1
+0.6
-0.7
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.1
+0.7
-0.7
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.0
+0.9
-1.0
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.2
+0.1
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.2
+0.1
-0.2
N.D.
N.D.
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