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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_02950 and CSW01_02955 are separated by 122 nucleotides
CSW01_02955 and CSW01_02960 overlap by 7 nucleotides
CSW01_02960 and CSW01_02965 are separated by 6 nucleotides
CSW01_02965 and CSW01_02970 are separated by 111 nucleotides
CSW01_02950: CSW01_02950 - sodium ion-translocating decarboxylase subunit beta, at 583,190 to 584,320
_02950
CSW01_02955: CSW01_02955 - NADP-dependent oxidoreductase, at 584,443 to 585,393
_02955
CSW01_02960: CSW01_02960 - DedA family protein, at 585,387 to 585,848
_02960
CSW01_02965: CSW01_02965 - insulinase family protein, at 585,855 to 588,713
_02965
CSW01_02970: CSW01_02970 - glutamate--cysteine ligase, at 588,825 to 590,399
_02970
Group
Condition
CSW01
_02950
CSW01
_02955
CSW01
_02960
CSW01
_02965
CSW01
_02970
phage
ICP3_phage_41.1_MOI_rep1
-0.3
+0.0
-0.3
-0.1
-1.9
phage
ICP1_phage_235.3_MOI_rep1
-0.4
+0.2
-0.2
+0.1
-2.2
phage
ICP3_phage_411_MOI_rep2
-0.3
+0.0
-0.2
-0.0
-1.8
phage
ICP1_phage_0.23_MOI_rep2
-0.3
+0.2
-0.1
-0.1
-2.0
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.1
+0.0
-0.0
-2.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.1
+0.0
-0.2
-2.1
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.4
-0.1
+0.1
-1.7
phage
ICP1_phage_2.3_MOI_rep2
-0.0
+0.0
+0.0
-0.0
-1.8
phage
ICP3_phage_41.1_MOI_rep2
-0.0
+0.1
-0.1
-0.1
-1.6
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.0
+0.3
+0.0
-2.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.1
+0.0
-0.2
-1.2
phage
ICP3_phage_0.41_MOI_rep1
+0.0
+0.0
+0.2
-0.0
-1.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
-0.1
-0.0
-0.1
-1.2
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.0
+0.0
+0.1
-1.3
phage
ICP3_phage_411_MOI_rep1
-0.3
+0.2
+0.2
+0.0
-1.7
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
-0.1
+0.1
-0.1
-1.2
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.1
+0.1
-0.1
-1.7
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.0
-0.2
+0.0
-0.1
-1.0
phage
NoPhageControl
-0.0
+0.0
-0.0
-0.1
-1.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
-0.1
-0.0
+0.0
-0.9
phage
NoPhageControl
+0.0
-0.1
+0.0
-0.1
-1.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.2
-0.2
-0.0
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.2
-0.1
+0.0
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
-0.1
-0.1
-0.1
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.0
-0.0
-0.2
-0.9
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.1
-0.0
-0.0
-0.7
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.2
+0.3
+0.1
-1.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.2
-0.1
-0.1
-0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.0
-0.1
+0.2
-0.0
-0.6
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.0
+0.5
+0.1
-0.9
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