Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_02815 and CSW01_02820 overlap by 38 nucleotidesCSW01_02820 and CSW01_02825 overlap by 8 nucleotidesCSW01_02825 and CSW01_02830 overlap by 1 nucleotidesCSW01_02830 and CSW01_02835 are separated by 73 nucleotides CSW01_02815: CSW01_02815 - tRNA pseudouridine(13) synthase TruD, at 560,006 to 561,091 _02815 CSW01_02820: CSW01_02820 - 5'-nucleotidase SurE, at 561,054 to 561,845 _02820 CSW01_02825: CSW01_02825 - protein-L-isoaspartate O-methyltransferase, at 561,838 to 562,464 _02825 CSW01_02830: CSW01_02830 - murein hydrolase activator NlpD, at 562,464 to 563,399 _02830 CSW01_02835: CSW01_02835 - RNA polymerase sigma factor RpoS, at 563,473 to 564,480 _02835
Group Condition CSW01_02815 CSW01_02820 CSW01_02825 CSW01_02830 CSW01_02835
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.1 -0.5 -0.4 -1.8 +0.5
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.1 -0.4 -0.5 -1.8 +0.5
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -0.1 -0.4 +0.2 -0.6 +0.1
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -0.0 -0.4 +0.0 -0.3 -0.0
lb_aerobic LB_Aerobic_18HR_ZN18A -0.3 -0.1 +0.1 -0.6 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B -0.1 -0.4 +0.1 -0.1 -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20B -0.2 -0.3 -0.1 +0.3 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -0.2 -0.2 +0.0 +0.2 -0.2
lb_aerobic LB_Aerobic_180MIN_ZN14B -0.0 -0.3 -0.1 +0.3 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -0.1 -0.2 +0.3 -0.1 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -0.2 -0.2 +0.2 +0.1 +0.0
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.1 -0.1 +0.2 +0.3 +0.0
phage ICP3_phage_41.1_MOI_rep2 +0.0 -0.2 -0.5 +0.2 +0.9
phage ICP1_phage_2.3_MOI_rep1 -0.1 -0.4 -0.2 +0.4 +0.9
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -0.1 -0.0 +0.0 +0.1 +0.7
lb_aerobic LB_Aerobic_18HR_ZN18B -0.1 +0.0 +0.0 +0.2 +0.6
phage ICP3_phage_41.1_MOI_rep1 -0.1 -0.0 -0.3 +0.5 +0.9
phage ICP3_phage_411_MOI_rep2 -0.0 +0.3 -0.5 +0.3 +1.0
phage ICP3_phage_411_MOI_rep1 -0.2 +0.1 +0.0 +0.3 +0.9
phage ICP3_phage_0.41_MOI_rep2 +0.1 -0.1 -0.4 +0.6 +1.0
phage ICP1_phage_0.23_MOI_rep1 +0.1 +0.1 -0.3 +0.5 +0.9
phage ICP1_phage_2.3_MOI_rep2 -0.2 +0.3 -0.2 +0.4 +1.0
phage ICP1_phage_235.3_MOI_rep1 +0.1 -0.2 -0.2 +0.6 +1.1
phage ICP3_phage_0.41_MOI_rep1 -0.0 +0.3 +0.1 +0.1 +1.0
phage ICP1_phage_235.3_MOI_rep2 +0.1 +0.2 -0.2 +0.4 +0.9
phage ICP1_phage_0.23_MOI_rep2 +0.1 -0.1 +0.2 +0.5 +0.9
phage ICP3_phage_4.1_MOI_rep1 +0.1 +0.2 -0.3 +0.5 +1.0
phage ICP3_phage_4.1_MOI_rep2 +0.2 +0.0 +0.2 +0.4 +1.1
phage ICP1_phage_23.5_MOI_rep1 +0.2 +0.4 -0.0 +0.3 +1.1
phage ICP1_phage_23.5_MOI_rep2 +0.1 +0.6 +0.2 +0.2 +0.9
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