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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_02715 and CSW01_02720 are separated by 621 nucleotides
CSW01_02720 and CSW01_02725 overlap by 4 nucleotides
CSW01_02725 and CSW01_02730 are separated by 103 nucleotides
CSW01_02730 and CSW01_02735 are separated by 389 nucleotides
CSW01_02715: CSW01_02715 - transcriptional antiterminator, at 541,751 to 542,479
_02715
CSW01_02720: CSW01_02720 - AraC family transcriptional regulator, at 543,101 to 543,916
_02720
CSW01_02725: CSW01_02725 - methyl-accepting chemotaxis protein, at 543,913 to 545,793
_02725
CSW01_02730: CSW01_02730 - diguanylate phosphodiesterase, at 545,897 to 547,129
_02730
CSW01_02735: CSW01_02735 - integrase, at 547,519 to 548,760
_02735
Group
Condition
CSW01
_02715
CSW01
_02720
CSW01
_02725
CSW01
_02730
CSW01
_02735
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.0
-0.5
-0.1
-0.3
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.0
-0.2
-0.2
-0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.1
-0.2
-0.4
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-0.3
-0.1
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.0
-0.3
-0.2
-0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.0
-0.1
-0.4
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.0
-0.3
-0.1
-0.1
-0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.2
-0.2
-0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.2
-0.1
-0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.3
-0.0
-0.1
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
-0.2
-0.0
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.0
-0.2
-0.1
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
-0.2
-0.1
-0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.2
-0.2
-0.0
-0.2
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.1
-0.2
-0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
-0.2
-0.0
-0.2
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
-0.2
-0.1
-0.1
-0.1
phage
NoPhageControl
+0.1
-0.1
-0.1
-0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.2
+0.0
-0.0
-0.2
+0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.1
-0.1
-0.1
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
-0.2
+0.0
-0.1
-0.1
phage
NoPhageControl
+0.2
-0.1
-0.1
-0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.3
+0.1
-0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.4
+0.3
-0.2
-0.1
+0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.0
+0.2
-0.2
-0.2
+0.0
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.1
-0.1
-0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.1
-0.2
-0.1
-0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
-0.2
-0.0
-0.1
-0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.2
-0.2
+0.0
+0.0
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.2
-0.1
+0.0
+0.2
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