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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_02635 and CSW01_02640 are separated by 81 nucleotides
CSW01_02640 and CSW01_02645 are separated by 80 nucleotides
CSW01_02645 and CSW01_02650 are separated by 502 nucleotides
CSW01_02650 and CSW01_02655 are separated by 388 nucleotides
CSW01_02635: CSW01_02635 - AlpA family transcriptional regulator, at 529,142 to 529,342
_02635
CSW01_02640: CSW01_02640 - ribonuclease H, at 529,424 to 529,864
_02640
CSW01_02645: CSW01_02645 - IS3 family transposase, at 529,945 to 531,136
_02645
CSW01_02650: CSW01_02650 - IS5/IS1182 family transposase, at 531,639 to 532,549
_02650
CSW01_02655: CSW01_02655 - type II secretion system protein, at 532,938 to 533,462
_02655
Group
Condition
CSW01
_02635
CSW01
_02640
CSW01
_02645
CSW01
_02650
CSW01
_02655
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.3
+0.1
-0.2
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.0
-0.0
-0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.3
-0.1
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
-0.1
+0.0
+0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
-0.1
-0.0
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
-0.2
-0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.0
-0.2
-0.0
-0.0
-0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
+0.0
-0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
+0.0
-0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
-0.1
+0.1
-0.0
-0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.2
-0.1
+0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.6
-0.2
+0.1
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.3
+0.0
+0.1
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.0
+0.1
-0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.2
-0.0
-0.2
+0.3
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.2
-0.0
-0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.1
-0.0
-0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.0
-0.2
+0.0
+0.2
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.2
-0.0
+0.2
-0.1
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.2
-0.2
-0.0
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.2
+0.1
-0.0
-0.1
phage
ICP1_phage_23.5_MOI_rep1
-0.0
-0.3
+0.0
+0.3
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.2
-0.1
-0.1
+0.0
+0.1
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.2
+0.1
+0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.1
-0.2
+0.2
+0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.4
+0.2
-0.0
+0.0
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.3
+0.3
-0.0
+0.4
+0.0
phage
ICP3_phage_411_MOI_rep1
+0.0
+0.2
+0.0
+0.3
-0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.3
-0.0
+0.2
+0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.4
+0.0
+0.1
+0.2
+0.0
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