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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_02510 and CSW01_02515 are separated by 277 nucleotides
CSW01_02515 and CSW01_02520 are separated by 71 nucleotides
CSW01_02520 and CSW01_02525 are separated by 144 nucleotides
CSW01_02525 and CSW01_02530 are separated by 151 nucleotides
CSW01_02510: CSW01_02510 - S-adenosylmethionine synthase, at 498,910 to 500,067
_02510
CSW01_02515: CSW01_02515 - transketolase, at 500,345 to 502,429
_02515
CSW01_02520: CSW01_02520 - iron-regulated virulence regulatory protein IrgB, at 502,501 to 503,397
_02520
CSW01_02525: CSW01_02525 - iron-regulated outer membrane virulence protein, at 503,542 to 505,500
_02525
CSW01_02530: CSW01_02530 - D-erythrose-4-phosphate dehydrogenase, at 505,652 to 506,677
_02530
Group
Condition
CSW01
_02510
CSW01
_02515
CSW01
_02520
CSW01
_02525
CSW01
_02530
phage
ICP1_phage_235.3_MOI_rep2
N.D.
+0.0
-0.1
+0.1
-1.9
phage
ICP1_phage_0.23_MOI_rep2
N.D.
+0.1
-0.1
-0.1
-1.5
phage
ICP3_phage_411_MOI_rep1
N.D.
+0.1
-0.2
-0.0
-1.5
phage
ICP1_phage_23.5_MOI_rep1
N.D.
+0.2
+0.1
-0.1
-1.8
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
-0.1
-0.6
-0.4
-0.4
phage
ICP3_phage_411_MOI_rep2
N.D.
+0.0
-0.1
-0.1
-1.3
phage
ICP1_phage_23.5_MOI_rep2
N.D.
+0.1
+0.1
-0.1
-1.5
phage
ICP1_phage_2.3_MOI_rep1
N.D.
+0.0
-0.2
-0.2
-1.1
phage
ICP3_phage_4.1_MOI_rep2
N.D.
-0.0
+0.1
-0.1
-1.3
phage
ICP1_phage_2.3_MOI_rep2
N.D.
+0.2
-0.2
-0.0
-1.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
-0.1
-0.4
-0.4
-0.3
phage
ICP3_phage_41.1_MOI_rep2
N.D.
+0.0
-0.1
-0.0
-1.1
phage
ICP3_phage_41.1_MOI_rep1
N.D.
+0.1
+0.1
-0.0
-1.2
phage
ICP1_phage_0.23_MOI_rep1
N.D.
+0.2
-0.1
-0.0
-0.9
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+0.2
+0.0
+0.0
-1.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
N.D.
-0.0
-0.2
-0.3
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
N.D.
-0.0
-0.3
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
-0.1
-0.2
-0.2
-0.2
phage
ICP3_phage_0.41_MOI_rep1
N.D.
+0.2
+0.4
-0.0
-1.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
-0.0
-0.0
+0.1
-0.6
phage
ICP3_phage_4.1_MOI_rep1
N.D.
+0.1
+0.0
-0.1
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
+0.0
-0.0
+0.1
-0.6
phage
NoPhageControl
N.D.
-0.0
-0.1
-0.1
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
-0.1
-0.1
+0.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
-0.0
-0.0
+0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
-0.1
+0.0
+0.1
-0.3
phage
ICP1_phage_235.3_MOI_rep1
N.D.
+0.2
+0.3
-0.1
-0.6
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
-0.0
+0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
+0.0
+0.1
+0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
+0.1
+0.1
+0.0
-0.2
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