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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_02190 and CSW01_02195 overlap by 14 nucleotides
CSW01_02195 and CSW01_02200 overlap by 58 nucleotides
CSW01_02200 and CSW01_02205 are separated by 25 nucleotides
CSW01_02205 and CSW01_02210 are separated by 12 nucleotides
CSW01_02190: CSW01_02190 - rod shape-determining protein MreC, at 441,996 to 442,886
_02190
CSW01_02195: CSW01_02195 - rod shape-determining protein MreD, at 442,873 to 443,361
_02195
CSW01_02200: CSW01_02200 - septum formation inhibitor Maf, at 443,304 to 443,921
_02200
CSW01_02205: CSW01_02205 - ribonuclease E/G, at 443,947 to 445,416
_02205
CSW01_02210: CSW01_02210 - DUF3971 domain-containing protein, at 445,429 to 449,304
_02210
Group
Condition
CSW01
_02190
CSW01
_02195
CSW01
_02200
CSW01
_02205
CSW01
_02210
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
-0.5
-0.8
-0.4
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
-0.7
-0.8
-0.3
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
-0.8
-0.6
-0.2
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
-0.6
-0.7
-0.3
phage
ICP1_phage_2.3_MOI_rep1
N.D.
N.D.
-0.5
-0.9
-0.2
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
-0.5
-0.5
-0.3
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
-0.4
-0.7
-0.2
phage
ICP3_phage_411_MOI_rep1
N.D.
N.D.
-0.6
-0.3
-0.3
phage
ICP1_phage_23.5_MOI_rep2
N.D.
N.D.
-0.3
-0.7
-0.1
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
-0.2
-0.7
-0.2
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
-0.4
-0.4
-0.2
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
-0.5
-0.3
-0.2
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
-0.3
-0.3
-0.2
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
-0.3
-0.2
-0.3
phage
NoPhageControl
N.D.
N.D.
-0.3
-0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
N.D.
N.D.
-0.2
-0.5
+0.0
phage
ICP3_phage_0.41_MOI_rep1
N.D.
N.D.
-0.0
-0.4
-0.2
phage
NoPhageControl
N.D.
N.D.
-0.2
-0.4
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
N.D.
-0.1
-0.5
+0.1
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
+0.2
-0.4
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
N.D.
-0.3
-0.4
+0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
N.D.
-0.0
-0.5
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
N.D.
+0.1
-0.1
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
N.D.
+0.2
-0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
N.D.
+0.0
+0.3
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
N.D.
+0.2
+0.0
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
N.D.
+0.1
+0.1
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
N.D.
+0.2
+0.1
+0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
N.D.
+0.2
+0.1
+0.6
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
+0.2
+0.2
+0.6
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