Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_02155 and CSW01_02160 are separated by 36 nucleotidesCSW01_02160 and CSW01_02165 overlap by 53 nucleotidesCSW01_02165 and CSW01_02170 overlap by 1 nucleotidesCSW01_02170 and CSW01_02175 overlap by 35 nucleotides CSW01_02155: CSW01_02155 - MSHA pilin protein MshA, at 434,190 to 434,726 _02155 CSW01_02160: CSW01_02160 - MSHA pilin protein MshC, at 434,763 to 435,251 _02160 CSW01_02165: CSW01_02165 - MSHA pilin protein MshD, at 435,199 to 435,810 _02165 CSW01_02170: CSW01_02170 - type II secretion system protein, at 435,810 to 436,580 _02170 CSW01_02175: CSW01_02175 - MSHA biogenesis protein MshP, at 436,546 to 436,977 _02175
Group Condition CSW01_02155 CSW01_02160 CSW01_02165 CSW01_02170 CSW01_02175
phage ICP1_phage_2.3_MOI_rep1 -0.8 -0.7 -0.3 -0.4 -0.5
phage ICP3_phage_41.1_MOI_rep1 -0.5 -0.6 -0.4 -0.4 -0.3
phage ICP3_phage_0.41_MOI_rep2 -0.8 -0.3 -0.0 -0.3 -0.7
phage ICP1_phage_235.3_MOI_rep1 -0.6 -0.8 -0.1 -0.2 -0.4
phage ICP1_phage_23.5_MOI_rep2 -0.0 -0.7 -0.4 -0.3 -0.8
phage ICP1_phage_0.23_MOI_rep2 -0.6 -0.3 +0.0 -0.3 -1.0
phage ICP3_phage_4.1_MOI_rep1 -0.3 -0.4 -0.7 -0.2 -0.4
phage ICP3_phage_411_MOI_rep2 -0.4 -0.7 -0.2 -0.2 -0.3
phage ICP1_phage_23.5_MOI_rep1 -0.4 +0.1 -0.6 -0.2 -0.5
phage ICP1_phage_2.3_MOI_rep2 -0.2 -0.3 -0.1 -0.2 -0.8
phage ICP1_phage_0.23_MOI_rep1 -0.5 -0.4 -0.4 -0.1 -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.4 +0.6 +0.2 +0.4 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.3 +0.4 +0.3 +0.4 +0.4
lb_aerobic LB_Aerobic_180MIN_ZN14B +0.6 +0.4 +0.2 +0.4 +0.4
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.5 +0.5 +0.5 +0.4 +0.6
lb_aerobic LB_Aerobic_120MIN_ZN10B +0.4 +0.6 +0.4 +0.5 +0.6
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.6 +0.7 +0.5 +0.5 +0.4
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A +0.3 +0.6 +0.5 +0.7 +0.7
lb_aerobic LB_Aerobic_60MIN_ZN2B +0.6 +0.6 +0.4 +0.6 +0.8
lb_aerobic LB_Aerobic_180MIN_ZN14A +0.6 +0.7 +0.6 +0.6 +0.6
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.6 +0.8 +0.6 +0.6 +0.6
lb_aerobic LB_Aerobic_18HR_ZN18A +0.4 +0.7 +0.7 +0.7 +0.8
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.6 +0.8 +0.6 +0.7 +0.6
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A +0.6 +0.7 +0.6 +0.7 +0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B +0.6 +0.6 +0.6 +0.7 +0.8
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.8 +0.7 +0.7 +0.7 +0.5
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.7 +0.7 +0.6 +0.7 +0.7
lb_anaerobic LB_Anaerobic_120MIN_ZN12B +0.8 +0.6 +0.7 +0.7 +0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.8 +0.8 +0.7 +0.8 +0.8
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.7 +0.9 +0.9 +0.9 +0.9
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CSW01_02155
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