Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_02090 and CSW01_02095 are separated by 291 nucleotidesCSW01_02095 and CSW01_02100 are separated by 114 nucleotidesCSW01_02100 and CSW01_02105 are separated by 12 nucleotidesCSW01_02105 and CSW01_02110 overlap by 4 nucleotides CSW01_02090: CSW01_02090 - helix-turn-helix transcriptional regulator, at 420,419 to 421,063 _02090 CSW01_02095: CSW01_02095 - ssDNA-binding protein, at 421,355 to 421,888 _02095 CSW01_02100: CSW01_02100 - RNase E specificity factor CsrD, at 422,003 to 424,024 _02100 CSW01_02105: CSW01_02105 - MSHA biogenesis protein MshI, at 424,037 to 425,476 _02105 CSW01_02110: CSW01_02110 - MSHA biogenesis protein MshJ, at 425,473 to 426,123 _02110
Group Condition CSW01_02090 CSW01_02095 CSW01_02100 CSW01_02105 CSW01_02110
phage ICP1_phage_0.23_MOI_rep2 +0.1 N.D. -0.6 -0.8 -0.2
phage ICP1_phage_235.3_MOI_rep2 -0.4 N.D. -0.4 -0.3 -0.2
phage ICP1_phage_2.3_MOI_rep2 +0.1 N.D. -0.8 -0.3 -0.2
phage ICP3_phage_411_MOI_rep1 -0.0 N.D. -0.5 -0.3 -0.4
phage ICP1_phage_23.5_MOI_rep2 -0.1 N.D. -0.4 -0.3 -0.4
phage ICP3_phage_4.1_MOI_rep1 +0.4 N.D. -0.6 -0.4 -0.4
phage ICP1_phage_0.23_MOI_rep1 -0.0 N.D. -0.5 -0.5 +0.2
phage ICP3_phage_0.41_MOI_rep1 +0.1 N.D. -0.4 -0.4 +0.3
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.1 N.D. -0.2 +0.4 +0.5
lb_aerobic LB_Aerobic_180MIN_ZN14B +0.2 N.D. +0.1 +0.4 +0.4
lb_aerobic LB_Aerobic_18HR_ZN18B +0.3 N.D. +0.4 +0.0 +0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B +0.3 N.D. +0.3 +0.3 +0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.2 N.D. -0.1 +0.7 +0.8
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.3 N.D. +0.1 +0.4 +0.4
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.2 N.D. +0.3 +0.3 +0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B +0.1 N.D. +0.0 +0.7 +0.6
lb_aerobic LB_Aerobic_60MIN_ZN2B +0.2 N.D. -0.0 +0.6 +0.6
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.3 N.D. -0.4 +0.8 +0.8
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.2 N.D. +0.1 +0.6 +0.6
lb_aerobic LB_Aerobic_120MIN_ZN10B +0.2 N.D. +0.2 +0.5 +0.5
lb_aerobic LB_Aerobic_18HR_ZN18A +0.3 N.D. -0.4 +0.7 +1.0
lb_aerobic LB_Aerobic_180MIN_ZN14A +0.3 N.D. -0.0 +0.6 +0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A +0.3 N.D. -0.2 +0.7 +0.8
lb_anaerobic LB_Anaerobic_18HR_ZN20A +0.3 N.D. +0.5 +0.4 +0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.2 N.D. +0.1 +0.7 +0.8
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.3 N.D. -0.1 +0.8 +0.8
lb_anaerobic LB_Anaerobic_120MIN_ZN12B +0.2 N.D. +0.1 +0.7 +0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.3 N.D. +0.1 +0.7 +0.8
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.2 N.D. +0.1 +0.8 +0.9
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A +0.4 N.D. +0.4 +0.7 +0.6
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CSW01_02090
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CSW01_02110
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