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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01850 and CSW01_01855 are separated by 42 nucleotides
CSW01_01855 and CSW01_01860 are separated by 40 nucleotides
CSW01_01860 and CSW01_01865 are separated by 2 nucleotides
CSW01_01865 and CSW01_01870 are separated by 136 nucleotides
CSW01_01850: CSW01_01850 - protease modulator HflC, at 371,711 to 372,691
_01850
CSW01_01855: CSW01_01855 - DUF2065 domain-containing protein, at 372,734 to 372,940
_01855
CSW01_01860: CSW01_01860 - SlyX protein, at 372,981 to 373,208
_01860
CSW01_01865: CSW01_01865 - hypothetical protein, at 373,211 to 374,194
_01865
CSW01_01870: CSW01_01870 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA, at 374,331 to 375,110
_01870
Group
Condition
CSW01
_01850
CSW01
_01855
CSW01
_01860
CSW01
_01865
CSW01
_01870
phage
ICP3_phage_0.41_MOI_rep2
-0.3
-0.9
-1.4
-0.2
+0.4
phage
ICP1_phage_0.23_MOI_rep2
-1.1
+0.1
-0.7
-0.2
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.0
-0.8
-0.4
-0.0
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.0
-0.8
+0.0
-0.2
-0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.1
-0.4
-0.6
+0.1
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.3
-1.2
-0.0
+0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.4
-0.6
-0.3
+0.3
+0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.3
+0.3
-1.1
-0.0
+0.4
phage
ICP1_phage_2.3_MOI_rep2
+0.1
-0.2
-0.7
+0.0
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
-0.4
-0.5
+0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.2
+0.3
-0.9
-0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.2
-0.2
-0.6
+0.3
+0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.4
+0.1
-0.2
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.9
+0.2
-0.2
+0.2
+0.2
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.6
-0.1
+0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.0
-0.2
+0.0
+0.2
+0.6
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.1
-0.1
+0.2
+0.3
+0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.6
-0.0
+0.2
+0.2
+0.2
phage
NoPhageControl
-0.2
-0.2
+0.5
-0.1
-0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.9
-1.0
-0.4
+0.3
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.1
-0.3
-0.2
+0.3
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.7
-0.3
-0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
+0.2
-0.5
+0.1
+0.3
phage
ICP1_phage_23.5_MOI_rep1
+0.4
+0.4
-0.3
-0.3
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.2
-0.0
+0.5
+0.6
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
-0.0
+0.2
+0.4
+0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.2
+0.7
+0.4
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.3
+0.0
+0.0
+0.4
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.8
-0.2
-0.0
+0.3
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.4
+0.3
+0.1
+0.3
+0.3
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