Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_01835 and CSW01_01840 are separated by 32 nucleotidesCSW01_01840 and CSW01_01845 are separated by 45 nucleotidesCSW01_01845 and CSW01_01850 are separated by 2 nucleotidesCSW01_01850 and CSW01_01855 are separated by 42 nucleotides CSW01_01835: CSW01_01835 - RNA-binding protein Hfq, at 368,890 to 369,153 _01835 CSW01_01840: CSW01_01840 - GTPase HflX, at 369,186 to 370,475 _01840 CSW01_01845: CSW01_01845 - protease modulator HflK, at 370,521 to 371,708 _01845 CSW01_01850: CSW01_01850 - protease modulator HflC, at 371,711 to 372,691 _01850 CSW01_01855: CSW01_01855 - DUF2065 domain-containing protein, at 372,734 to 372,940 _01855
Group Condition CSW01_01835 CSW01_01840 CSW01_01845 CSW01_01850 CSW01_01855
lb_aerobic LB_Aerobic_18HR_ZN18A N.D. +0.0 -1.3 -1.1 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B N.D. +0.2 -1.3 -1.0 -0.2
phage ICP3_phage_0.41_MOI_rep2 N.D. -0.5 -0.4 -0.3 -0.9
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A N.D. -0.2 -0.6 -0.4 -0.6
lb_anaerobic LB_Anaerobic_18HR_ZN20B N.D. -0.1 -1.0 -0.9 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A N.D. -0.0 -0.9 -0.6 -0.0
phage ICP3_phage_0.41_MOI_rep1 N.D. -0.2 -0.4 -0.0 -0.8
phage ICP1_phage_235.3_MOI_rep2 N.D. -0.3 -0.2 +0.0 -0.8
lb_aerobic LB_Aerobic_60MIN_ZN2B N.D. -0.1 -0.3 -0.1 -0.6
lb_anaerobic LB_Anaerobic_120MIN_ZN12A N.D. -0.2 -0.2 -0.1 -0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B N.D. -0.2 -0.5 +0.0 -0.3
phage ICP1_phage_2.3_MOI_rep1 N.D. +0.1 -0.3 -0.1 -0.5
lb_anaerobic LB_Anaerobic_60MIN_ZN4B N.D. -0.0 -0.5 -0.1 -0.0
phage ICP1_phage_0.23_MOI_rep2 N.D. +0.3 +0.0 -1.1 +0.1
phage ICP1_phage_0.23_MOI_rep1 N.D. -0.3 +0.0 -0.4 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A N.D. +0.1 -0.3 -0.2 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A N.D. +0.1 -0.4 -0.2 -0.0
lb_aerobic LB_Aerobic_180MIN_ZN14A N.D. -0.0 -0.6 +0.2 +0.0
phage NoPhageControl N.D. +0.2 -0.2 -0.2 -0.2
phage ICP1_phage_2.3_MOI_rep2 N.D. -0.2 -0.2 +0.1 -0.2
phage ICP3_phage_411_MOI_rep1 N.D. -0.3 -0.6 -0.2 +0.7
phage ICP3_phage_41.1_MOI_rep2 N.D. -0.3 -0.0 -0.3 +0.3
phage ICP3_phage_4.1_MOI_rep2 N.D. -0.3 -0.5 -0.2 +0.7
phage ICP3_phage_411_MOI_rep2 N.D. -0.1 -0.3 -0.1 +0.3
lb_anaerobic LB_Anaerobic_180MIN_ZN16B N.D. +0.1 -0.4 +0.1 -0.0
phage ICP1_phage_235.3_MOI_rep1 N.D. -0.1 -0.6 +0.2 +0.3
phage ICP1_phage_23.5_MOI_rep1 N.D. +0.0 -0.3 +0.4 +0.4
phage ICP3_phage_4.1_MOI_rep1 N.D. -0.0 -0.1 +0.1 +0.9
lb_aerobic LB_Aerobic_18HR_ZN18B N.D. +0.0 +0.4 +0.4 +0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A N.D. +0.3 +0.4 +0.8 -0.2
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