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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01540 and CSW01_01545 are separated by 92 nucleotides
CSW01_01545 and CSW01_01550 are separated by 122 nucleotides
CSW01_01550 and CSW01_01555 are separated by 7 nucleotides
CSW01_01555 and CSW01_01560 are separated by 111 nucleotides
CSW01_01540: CSW01_01540 - 3-phenylpropionate MFS transporter, at 308,734 to 309,924
_01540
CSW01_01545: CSW01_01545 - hybrid sensor histidine kinase/response regulator, at 310,017 to 313,460
_01545
CSW01_01550: CSW01_01550 - guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 313,583 to 315,076
_01550
CSW01_01555: CSW01_01555 - ATP-dependent RNA helicase RhlB, at 315,084 to 316,400
_01555
CSW01_01560: CSW01_01560 - thioredoxin TrxA, at 316,512 to 316,838
_01560
Group
Condition
CSW01
_01540
CSW01
_01545
CSW01
_01550
CSW01
_01555
CSW01
_01560
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.1
-0.4
-1.0
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.0
-0.1
-0.3
-0.9
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.1
-0.3
-0.9
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.0
-0.0
-0.5
-0.8
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.0
-0.0
-0.2
-0.9
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.0
-0.2
-0.9
N.D.
phage
ICP3_phage_41.1_MOI_rep2
+0.0
-0.0
-0.2
-0.9
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+0.1
-0.0
-0.4
-0.8
N.D.
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.1
-0.4
-0.8
N.D.
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.0
-0.2
-0.9
N.D.
phage
ICP3_phage_411_MOI_rep1
+0.1
+0.1
+0.0
-1.2
N.D.
phage
ICP1_phage_0.23_MOI_rep2
+0.1
+0.0
-0.4
-0.7
N.D.
phage
NoPhageControl
+0.0
+0.0
-0.4
-0.4
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.0
-0.1
-1.0
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.1
-0.2
-0.2
-0.6
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.0
+0.0
+0.0
-0.8
N.D.
phage
ICP1_phage_2.3_MOI_rep1
+0.1
+0.1
-0.2
-0.7
N.D.
phage
NoPhageControl
+0.1
-0.0
-0.3
-0.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
-0.0
-0.3
-0.2
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.0
-0.3
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
+0.0
-0.3
-0.2
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.0
+0.0
-0.3
-0.2
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
+0.0
-0.4
-0.1
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
+0.1
-0.2
-0.2
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
+0.0
-0.1
-0.3
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.2
+0.0
-0.3
-0.2
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
+0.1
-0.3
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.2
-0.1
-0.2
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
+0.3
-0.1
+0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.0
+0.3
-0.1
+0.1
N.D.
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