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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01515 and CSW01_01520 are separated by 379 nucleotides
CSW01_01520 and CSW01_01525 are separated by 202 nucleotides
CSW01_01525 and CSW01_01530 are separated by 8 nucleotides
CSW01_01530 and CSW01_01535 overlap by 46 nucleotides
CSW01_01515: CSW01_01515 - type II 3-dehydroquinate dehydratase, at 303,029 to 303,481
_01515
CSW01_01520: CSW01_01520 - acetyl-coenzyme A synthetase, at 303,861 to 305,810
_01520
CSW01_01525: CSW01_01525 - 3'-5' exonuclease, at 306,013 to 306,642
_01525
CSW01_01530: CSW01_01530 - cyclic nucleotide-binding protein, at 306,651 to 308,474
_01530
CSW01_01535: CSW01_01535 - hypothetical protein, at 308,429 to 308,635
_01535
Group
Condition
CSW01
_01515
CSW01
_01520
CSW01
_01525
CSW01
_01530
CSW01
_01535
phage
NoPhageControl
-1.5
+0.0
-0.0
-0.0
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.9
-0.0
+0.2
-0.9
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.4
-0.2
-0.6
+0.0
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.6
-0.2
-0.5
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-1.2
+0.0
-0.1
-0.1
+0.0
phage
NoPhageControl
-0.9
-0.1
-0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-1.3
+0.1
-0.0
-0.0
+0.2
phage
ICP3_phage_411_MOI_rep2
-1.3
+0.3
-0.2
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-1.1
+0.3
-0.1
+0.5
-0.4
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-1.1
+0.1
+0.0
+0.0
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
+0.0
+0.3
-0.9
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.9
+0.0
+0.0
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.8
-0.0
-0.1
-0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.7
+0.1
-0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.8
+0.1
-0.1
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.8
+0.1
-0.0
+0.0
+0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.4
-0.1
+0.4
-0.9
phage
ICP3_phage_0.41_MOI_rep2
-0.8
+0.5
+0.1
+0.4
-0.5
phage
ICP3_phage_411_MOI_rep1
-0.6
+0.5
+0.1
+0.3
-0.6
phage
ICP3_phage_41.1_MOI_rep2
-1.5
+0.5
+0.1
+0.5
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.6
+0.5
+0.2
+0.2
-1.9
phage
ICP3_phage_0.41_MOI_rep1
-0.6
+0.5
+0.2
+0.3
-0.6
phage
ICP3_phage_41.1_MOI_rep1
-0.7
+0.5
-0.0
+0.3
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.3
+0.5
-0.1
+0.4
-0.5
phage
ICP1_phage_235.3_MOI_rep2
-0.9
+0.4
+0.2
+0.5
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.3
+0.5
+0.0
+0.4
-0.2
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.5
+0.1
+0.4
-0.3
phage
ICP1_phage_235.3_MOI_rep1
+0.5
+0.3
+0.1
+0.4
-0.4
phage
ICP1_phage_23.5_MOI_rep1
+0.3
+0.5
-0.0
+0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.3
+0.4
+0.0
+0.6
-0.2
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