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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01385 and CSW01_01390 are separated by 362 nucleotides
CSW01_01390 and CSW01_01395 overlap by 35 nucleotides
CSW01_01395 and CSW01_01400 are separated by 347 nucleotides
CSW01_01400 and CSW01_01405 are separated by 371 nucleotides
CSW01_01385: CSW01_01385 - DUF416 domain-containing protein, at 272,299 to 272,886
_01385
CSW01_01390: CSW01_01390 - mannose-6-phosphate isomerase, class I, at 273,249 to 274,448
_01390
CSW01_01395: CSW01_01395 - transcriptional regulator, at 274,414 to 275,394
_01395
CSW01_01400: CSW01_01400 - HlyC/CorC family transporter, at 275,742 to 276,800
_01400
CSW01_01405: CSW01_01405 - DNA-binding protein HU-alpha, at 277,172 to 277,444
_01405
Group
Condition
CSW01
_01385
CSW01
_01390
CSW01
_01395
CSW01
_01400
CSW01
_01405
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
-0.1
-0.1
-0.3
-0.7
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.5
-0.0
-0.2
-0.2
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.3
-0.2
-0.2
-0.1
-0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.5
-0.2
-0.1
-0.1
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.3
+0.0
+0.0
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.4
-0.0
-0.2
-0.1
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.4
+0.1
-0.1
-0.2
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
-0.1
-0.1
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.2
-0.1
-0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
-0.4
-0.1
-0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.3
-0.5
-0.2
-0.0
+0.6
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.5
+0.2
-0.1
-0.2
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
-0.1
-0.1
-0.1
+0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
+0.1
-0.1
-0.1
+0.5
phage
ICP3_phage_4.1_MOI_rep1
-0.3
+2.3
-0.1
-0.1
+0.5
phage
ICP3_phage_411_MOI_rep1
-0.0
+2.2
+0.1
-0.1
+0.5
phage
ICP3_phage_41.1_MOI_rep1
-0.3
+2.2
+0.1
-0.1
+1.1
phage
ICP3_phage_4.1_MOI_rep2
-0.4
+2.4
-0.2
-0.1
+1.0
phage
ICP1_phage_235.3_MOI_rep1
-0.2
+3.2
-0.1
+0.0
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.0
+2.3
-0.0
+0.0
+0.7
phage
ICP3_phage_0.41_MOI_rep1
-0.3
+2.5
-0.1
-0.0
+1.0
phage
ICP3_phage_0.41_MOI_rep2
+0.1
+2.4
+0.1
+0.0
+0.6
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+3.3
-0.0
-0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.3
+2.2
+0.1
-0.2
+1.2
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+3.6
-0.1
+0.0
+0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+3.4
-0.0
+0.0
+0.5
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+3.2
-0.1
-0.0
+1.0
phage
ICP1_phage_23.5_MOI_rep2
-0.2
+3.3
+0.1
-0.0
+0.8
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+3.3
+0.0
-0.2
+1.1
phage
ICP1_phage_0.23_MOI_rep2
-0.3
+3.6
+0.1
-0.1
+0.8
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